RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
LINC01090-201ENST00000415357 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
LINC01090-201ENST00000415357 TESPA1A2RU30 521 aaPredicted RBP11.85□□□□□ -0.51
LINC01090-201ENST00000415357 TCP10L2B9ZVM9 353 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 SURF6O75683 361 aaKnown RBP11.85□□□□□ -0.51
LINC01090-201ENST00000415357 SLC10A3P09131 477 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 HSPA8P11142 646 aaKnown RBP11.85□□□□□ -0.51
LINC01090-201ENST00000415357 MAP2K2P36507 400 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 FKBP1BP68106 108 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 NOGQ13253 232 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 RASA3Q14644 834 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 MVPQ14764 893 aaKnown RBP11.85□□□□□ -0.51
LINC01090-201ENST00000415357 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
LINC01090-201ENST00000415357 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 MAST3O60307 1309 aa11.85□□□□□ -0.51
LINC01090-201ENST00000415357 MS4A1P11836 297 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
LINC01090-201ENST00000415357 LBX1P52954 281 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 HDLBPQ00341 1268 aaKnown RBP11.84□□□□□ -0.51
LINC01090-201ENST00000415357 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
LINC01090-201ENST00000415357 APOBEC3HQ6NTF7 200 aaKnown RBP11.84□□□□□ -0.51
LINC01090-201ENST00000415357 TYW1BQ6NUM6 668 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 PI16Q6UXB8 463 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 ZDHHC15Q96MV8 337 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 EPAS1Q99814 870 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 ANGEL1Q9UNK9 670 aaKnown RBP11.84□□□□□ -0.51
LINC01090-201ENST00000415357 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
LINC01090-201ENST00000415357 LDHBP07195 334 aaKnown RBP11.83□□□□□ -0.52
LINC01090-201ENST00000415357 TNNI3KQ59H18 835 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 GORABQ5T7V8 394 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 TMEM39BQ9GZU3 492 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 DAGLAQ9Y4D2 1042 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 FPGT-TNNI3KV9GXZ4 949 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 SALL1Q9NSC2 1324 aa11.83□□□□□ -0.52
LINC01090-201ENST00000415357 TNFAIP1Q13829 316 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 HHIPL2Q6UWX4 724 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 ARMC9Q7Z3E5 817 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 TEPSINQ96N21 525 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 BEGAINQ9BUH8 593 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
LINC01090-201ENST00000415357 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 ABCF2Q9UG63 623 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
LINC01090-201ENST00000415357 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
LINC01090-201ENST00000415357 OSBPP22059 807 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 MCAMP43121 646 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 LDLRAD1Q5T700 205 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 ZNF687Q8N1G0 1237 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 MRIQ9BWK5 157 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 CCDC8Q9H0W5 538 aaPredicted RBP11.81□□□□□ -0.52
LINC01090-201ENST00000415357 GPR108Q9NPR9 543 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 ZBTB40Q9NUA8 1239 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
LINC01090-201ENST00000415357 PDS5AQ29RF7 1337 aaKnown RBP11.81□□□□□ -0.52
LINC01090-201ENST00000415357 MAP3K7O43318 606 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 USP2O75604 605 aaPredicted RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 ARID4AP29374 1257 aaPredicted RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 TNNI2P48788 182 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 SUPT20HL1Q3ZLR7 823 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 TTC39AQ5SRH9 613 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 CDC42EP5Q6NZY7 148 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 SIRT2Q8IXJ6 389 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 TNS4Q8IZW8 715 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 ZGPATQ8N5A5 531 aaKnown RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 ZNF384Q8TF68 577 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 CSRNP1Q96S65 589 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 PRDM10Q9NQV6 1147 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 SNRKQ9NRH2 765 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 TMOD2Q9NZR1 351 aa11.8□□□□□ -0.52
LINC01090-201ENST00000415357 DBNLQ9UJU6 430 aaKnown RBP11.8□□□□□ -0.52
LINC01090-201ENST00000415357 APBB1O00213 710 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 TCP10Q12799 353 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 NFIAQ12857 509 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.79□□□□□ -0.52
LINC01090-201ENST00000415357 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
LINC01090-201ENST00000415357 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 USP40Q9NVE5 1235 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 GAKO14976 1311 aa11.79□□□□□ -0.52
LINC01090-201ENST00000415357 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 UQCRFS1P1P0C7P4 283 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
LINC01090-201ENST00000415357 MECOMQ03112 1051 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
LINC01090-201ENST00000415357 FAM83AQ86UY5 434 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms