RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ZNF333Q96JL9 665 aa15.41■□□□□ 0.06
NCKIPSD-203ENST00000415281 KIAA0100Q14667 2235 aaKnown RBP15.41■□□□□ 0.06
NCKIPSD-203ENST00000415281 SIPA1L1O43166 1804 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 GNAI2P04899 355 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 LACTBP83111 547 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 RRP1BQ14684 758 aaKnown RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 ANKRD23Q86SG2 305 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 NSUN4Q96CB9 384 aaKnown RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 ABCF2Q9UG63 623 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 MROH7-TTC4A0A0A0MT08 1334 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 MGAMO43451 1857 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 CDK5RAP2Q96SN8 1893 aa15.4■□□□□ 0.06
NCKIPSD-203ENST00000415281 PDHXO00330 501 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 RLBP1P12271 317 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 MCAMP43121 646 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 BTDP43251 543 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 PRPF38BQ5VTL8 546 aaKnown RBP15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 NEUROD6Q96NK8 337 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 CPA4Q9UI42 421 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 DOCK1Q14185 1865 aa15.39■□□□□ 0.05
NCKIPSD-203ENST00000415281 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 PTPRAP18433 802 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 ATP8B2P98198 1209 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 MVPQ14764 893 aaKnown RBP15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 SPATA5Q8NB90 893 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 SSH3Q8TE77 659 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 TRIM47Q96LD4 638 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 AKAP2Q9Y2D5 859 aa15.38■□□□□ 0.05
NCKIPSD-203ENST00000415281 ZBTB7BO15156 539 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 BCRP11274 1271 aa15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 SCYL3Q8IZE3 742 aa15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 ZGPATQ8N5A5 531 aaKnown RBP15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 SH3TC2Q8TF17 1288 aa15.37■□□□□ 0.05
NCKIPSD-203ENST00000415281 ATAD5Q96QE3 1844 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 A0A0G2JLL6 359 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 FAM196BA6NMK8 535 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 CXCL11O14625 94 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 NPM3O75607 178 aaKnown RBP15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 CYP2C8P10632 490 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 ERICH6Q7L0X2 663 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 PRRT2Q7Z6L0 340 aaPredicted RBP15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 C1orf115Q9H7X2 142 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 ZHX2Q9Y6X8 837 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 ZBED9Q6R2W3 1325 aa15.36■□□□□ 0.05
NCKIPSD-203ENST00000415281 TBC1D12O60347 775 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 JAG1P78504 1218 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 PICALMQ13492 652 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 ADGRA1Q86SQ6 560 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 DBNDD2Q9BQY9 259 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 GPR108Q9NPR9 543 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 SNRKQ9NRH2 765 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 FOCADQ5VW36 1801 aa15.35■□□□□ 0.05
NCKIPSD-203ENST00000415281 CYP2E1P05181 493 aaPredicted RBP15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 OSBPP22059 807 aa15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 G3BP1Q13283 466 aaKnown RBP eCLIP15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 NOP58Q9Y2X3 529 aaKnown RBP15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 DOCK3Q8IZD9 2030 aa15.34■□□□□ 0.05
NCKIPSD-203ENST00000415281 CTNND1O60716 968 aaKnown RBP15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 PSMC4P43686 418 aa15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 MTFR1Q15390 333 aa15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 SLC9C1Q4G0N8 1177 aa15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 SRRDQ9UH36 339 aa15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
NCKIPSD-203ENST00000415281 LOC285556D6RIA3 1793 aa15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 MYCP01106 439 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 EAF2Q96CJ1 260 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 SHISA4Q96DD7 197 aa15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 GABRQQ9UN88 632 aa15.32■□□□□ 0.04
NCKIPSD-203ENST00000415281 GNRH1P01148 92 aa15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 PPP4CP60510 307 aa15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 TREML2Q5T2D2 321 aa15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 ZNF512BQ96KM6 892 aaPredicted RBP15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 DNAJC18Q9H819 358 aa15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 PIH1D3Q9NQM4 214 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 RAI14Q9P0K7 980 aa15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 DBNLQ9UJU6 430 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-203ENST00000415281 SURF6O75683 361 aaKnown RBP15.3■□□□□ 0.04
NCKIPSD-203ENST00000415281 UQCRFS1P1P0C7P4 283 aa15.3■□□□□ 0.04
NCKIPSD-203ENST00000415281 ZAP70P43403 619 aa15.3■□□□□ 0.04
NCKIPSD-203ENST00000415281 PRMT2P55345 433 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms