RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KANK3Q6NY19 840 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 SIRT2Q8IXJ6 389 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 PHOX2BQ99453 314 aa10.96□□□□□ -0.65
SNHG3-201ENST00000413987 METTL5Q9NRN9 209 aaKnown RBP10.96□□□□□ -0.65
SNHG3-201ENST00000413987 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
SNHG3-201ENST00000413987 CCDC163A0A0D9SF12 145 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 PPP1R3GB7ZBB8 358 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 GPR37L1O60883 481 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 AP1G2O75843 785 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 CD2BP2O95400 341 aaKnown RBP10.96□□□□□ -0.66
SNHG3-201ENST00000413987 MBD3O95983 291 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 NBPF7P0C2Y1 421 aaPredicted RBP10.96□□□□□ -0.66
SNHG3-201ENST00000413987 NDUFV2P19404 249 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 CCDC93Q567U6 631 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 KSR2Q6VAB6 950 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 USP48Q86UV5 1035 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 ZNF710Q8N1W2 664 aa10.96□□□□□ -0.66
SNHG3-201ENST00000413987 RNASEH2AO75792 299 aaKnown RBP10.95□□□□□ -0.66
SNHG3-201ENST00000413987 IGKV5-2P06315 115 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 NOS2P35228 1153 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 CCT4P50991 539 aaKnown RBP10.95□□□□□ -0.66
SNHG3-201ENST00000413987 ZSCAN29Q8IWY8 852 aaPredicted RBP10.95□□□□□ -0.66
SNHG3-201ENST00000413987 FAM161BQ96MY7 647 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 MYD88Q99836 296 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 USP44Q9H0E7 712 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
SNHG3-201ENST00000413987 STARD3NLO95772 234 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 RXRBP28702 533 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 PPP2R5AQ15172 486 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 TMEM95Q3KNT9 176 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 DNTTIP2Q5QJE6 756 aaKnown RBP10.94□□□□□ -0.66
SNHG3-201ENST00000413987 ANKRD13DQ6ZTN6 518 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 KRT77Q7Z794 578 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 LINC00116Q8NCU8 138 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 SEZ6LQ9BYH1 1024 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 SRCIN1Q9C0H9 1055 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 ALDH8A1Q9H2A2 487 aaPredicted RBP10.94□□□□□ -0.66
SNHG3-201ENST00000413987 SYNRGQ9UMZ2 1314 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 NHSQ6T4R5 1651 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 CDC45O75419 566 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 CRKLP46109 303 aaKnown RBP10.94□□□□□ -0.66
SNHG3-201ENST00000413987 AMIGO3Q86WK7 504 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 MCF2L2Q86YR7 1114 aa10.94□□□□□ -0.66
SNHG3-201ENST00000413987 LRRFIP2Q9Y608 721 aaKnown RBP10.94□□□□□ -0.66
SNHG3-201ENST00000413987 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
SNHG3-201ENST00000413987 TMEM238LA0A1B0GVL6 79 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 H3BRB1 525 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 SLFNL1Q499Z3 407 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 INTS5Q6P9B9 1019 aaKnown RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 TUT1Q9H6E5 874 aaKnown RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 ARFGEF2Q9Y6D5 1785 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 ATP9BO43861 1147 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 DDX58O95786 925 aaKnown RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 OSBPP22059 807 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 CDC27P30260 824 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 HLFQ16534 295 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 GJC2Q5T442 439 aaPredicted RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 TEX19Q8NA77 164 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 SYAP1Q96A49 352 aaPredicted RBP10.93□□□□□ -0.66
SNHG3-201ENST00000413987 PPCSQ9HAB8 311 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 DCTN4Q9UJW0 460 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 INPP5FQ9Y2H2 1132 aa10.93□□□□□ -0.66
SNHG3-201ENST00000413987 USP17L8P0C7I0 530 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 ATP2B4P23634 1241 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 FLT3P36888 993 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 FAM160A1Q05DH4 1040 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PSMD2Q13200 908 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 UVSSAQ2YD98 709 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
SNHG3-201ENST00000413987 ENAMQ9NRM1 1142 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 A6NJY4 79 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 SMAPO00193 183 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 MYL1P05976 194 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PEX19P40855 299 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PPP1R15BQ5SWA1 713 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 VPS37AQ8NEZ2 397 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PIBF1Q8WXW3 757 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 CLP1Q92989 425 aaKnown RBP10.92□□□□□ -0.66
SNHG3-201ENST00000413987 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 KIF3AQ9Y496 699 aa10.92□□□□□ -0.66
SNHG3-201ENST00000413987 PNMA6EA0A0J9YXQ4 647 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 NEURL1BA8MQ27 555 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 ST18O60284 1047 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 ABL1P00519 1130 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 GPTP24298 496 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 ZNF76P36508 570 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 FAM184AQ8NB25 1140 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 GPT2Q8TD30 523 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 METTL22Q9BUU2 404 aaPredicted RBP10.91□□□□□ -0.66
SNHG3-201ENST00000413987 CXorf56Q9H5V9 222 aa10.91□□□□□ -0.66
SNHG3-201ENST00000413987 POLG2Q9UHN1 485 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms