RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PDS5AQ29RF7 1337 aaKnown RBP15.17■□□□□ 0.02
LIMS2-210ENST00000413578 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-210ENST00000413578 ADORA1P30542 326 aa15.16■□□□□ 0.02
LIMS2-210ENST00000413578 IL15P40933 162 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-210ENST00000413578 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
LIMS2-210ENST00000413578 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
LIMS2-210ENST00000413578 FAM163AQ96GL9 167 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-210ENST00000413578 COPRSQ9NQ92 184 aa15.16■□□□□ 0.02
LIMS2-210ENST00000413578 DDX4Q9NQI0 724 aaKnown RBP15.16■□□□□ 0.02
LIMS2-210ENST00000413578 ZHX2Q9Y6X8 837 aa15.16■□□□□ 0.02
LIMS2-210ENST00000413578 DDTLA6NHG4 134 aaPredicted RBP15.15■□□□□ 0.02
LIMS2-210ENST00000413578 SLURP2P0DP57 97 aa15.15■□□□□ 0.02
LIMS2-210ENST00000413578 FCGRTP55899 365 aa15.15■□□□□ 0.02
LIMS2-210ENST00000413578 RASGRF1Q13972 1273 aa15.15■□□□□ 0.02
LIMS2-210ENST00000413578 FASTKD5Q7L8L6 764 aaKnown RBP15.15■□□□□ 0.02
LIMS2-210ENST00000413578 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
LIMS2-210ENST00000413578 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
LIMS2-210ENST00000413578 U2AF1L4Q8WU68 220 aaKnown RBP15.15■□□□□ 0.02
LIMS2-210ENST00000413578 GABRQQ9UN88 632 aa15.15■□□□□ 0.02
LIMS2-210ENST00000413578 PA2G4Q9UQ80 394 aaKnown RBP15.15■□□□□ 0.02
LIMS2-210ENST00000413578 UBXN2AP68543 259 aa15.14■□□□□ 0.01
LIMS2-210ENST00000413578 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
LIMS2-210ENST00000413578 ZNF384Q8TF68 577 aa15.14■□□□□ 0.01
LIMS2-210ENST00000413578 RNF208Q9H0X6 261 aa15.14■□□□□ 0.01
LIMS2-210ENST00000413578 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
LIMS2-210ENST00000413578 RBM27Q9P2N5 1060 aaKnown RBP15.14■□□□□ 0.01
LIMS2-210ENST00000413578 LRRFIP2Q9Y608 721 aaKnown RBP15.14■□□□□ 0.01
LIMS2-210ENST00000413578 CTNND1O60716 968 aaKnown RBP15.13■□□□□ 0.01
LIMS2-210ENST00000413578 FLT3LGP49771 235 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 RHBDL3P58872 404 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 IRF5Q13568 498 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 PXYLP1Q8TE99 480 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 UNC93B1Q9H1C4 597 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 PICK1Q9NRD5 415 aa15.13■□□□□ 0.01
LIMS2-210ENST00000413578 MYH13Q9UKX3 1938 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 ADCY3O60266 1144 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 TBC1D12O60347 775 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
LIMS2-210ENST00000413578 SGPL1O95470 568 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 DPF3Q92784 378 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
LIMS2-210ENST00000413578 MROH7-TTC4A0A0A0MT08 1334 aa15.12■□□□□ 0.01
LIMS2-210ENST00000413578 GPR75-ASB3A0A0A6YYF3 556 aa15.11■□□□□ 0.01
LIMS2-210ENST00000413578 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-210ENST00000413578 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-210ENST00000413578 BTDP43251 543 aa15.11■□□□□ 0.01
LIMS2-210ENST00000413578 MEIS3Q99687 375 aa15.11■□□□□ 0.01
LIMS2-210ENST00000413578 BIN2Q9UBW5 565 aaPredicted RBP15.11■□□□□ 0.01
LIMS2-210ENST00000413578 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
LIMS2-210ENST00000413578 LAMA3Q16787 3333 aa15.11■□□□□ 0.01
LIMS2-210ENST00000413578 DOCK2Q92608 1830 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-210ENST00000413578 CAPN2P17655 700 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 TIMM10P62072 90 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 MTX1Q13505 466 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 GADL1Q6ZQY3 521 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 CCDC84Q86UT8 332 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-210ENST00000413578 DZIP1Q86YF9 867 aaKnown RBP15.1■□□□□ 0.01
LIMS2-210ENST00000413578 SLF2Q8IX21 1173 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-210ENST00000413578 ABCF2Q9UG63 623 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 AGTPBP1Q9UPW5 1226 aa15.1■□□□□ 0.01
LIMS2-210ENST00000413578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.1■□□□□ 0.01
LIMS2-210ENST00000413578 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-210ENST00000413578 A0A1B0GUL7 405 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 TRIM75PA6NK02 468 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 INHAP05111 366 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 ELNP15502 786 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 MECOMQ03112 1051 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 PICALMQ13492 652 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 FAM110CQ1W6H9 321 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 TREML2Q5T2D2 321 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 SPTY2D1Q68D10 685 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-210ENST00000413578 ZSCAN29Q8IWY8 852 aaPredicted RBP15.09■□□□□ 0.01
LIMS2-210ENST00000413578 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 API5Q9BZZ5 524 aaKnown RBP15.09■□□□□ 0.01
LIMS2-210ENST00000413578 CRISPLD2Q9H0B8 497 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 HDAC5Q9UQL6 1122 aa15.09■□□□□ 0.01
LIMS2-210ENST00000413578 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
LIMS2-210ENST00000413578 TFCP2Q12800 502 aa15.08■□□□□ 0
LIMS2-210ENST00000413578 PROCA1Q8NCQ7 364 aaPredicted RBP15.08■□□□□ 0
LIMS2-210ENST00000413578 SMCR8Q8TEV9 937 aaPredicted RBP15.08■□□□□ 0
LIMS2-210ENST00000413578 NSUN4Q96CB9 384 aaKnown RBP15.08■□□□□ 0
LIMS2-210ENST00000413578 NR2E3Q9Y5X4 410 aa15.08■□□□□ 0
LIMS2-210ENST00000413578 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0
LIMS2-210ENST00000413578 PTPRFP10586 1907 aa15.07■□□□□ 0
LIMS2-210ENST00000413578 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
LIMS2-210ENST00000413578 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
LIMS2-210ENST00000413578 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
LIMS2-210ENST00000413578 ANKRD13CQ8N6S4 541 aa15.07■□□□□ 0
LIMS2-210ENST00000413578 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
LIMS2-210ENST00000413578 HMG20BQ9P0W2 317 aa15.07■□□□□ 0
LIMS2-210ENST00000413578 DOCK1Q14185 1865 aa15.07■□□□□ 0
LIMS2-210ENST00000413578 MYH2Q9UKX2 1941 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 A0A1W2PPC1 479 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 FAM196BA6NMK8 535 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 PI16Q6UXB8 463 aa15.06■□□□□ 0
LIMS2-210ENST00000413578 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms