RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 GOLM1Q8NBJ4 401 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 ABCB6Q9NP58 842 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 TIMMDC1Q9NPL8 285 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 C11orf16Q9NQ32 467 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 KLHL42Q9P2K6 505 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 PLA2R1Q13018 1463 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 SPATA31D1Q6ZQQ2 1576 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 MIA2Q96PC5 1412 aa7.78□□□□□ -1.16
NOD1-203ENST00000413433 MROH2AA6NES4 1674 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 CAMSAP2Q08AD1 1489 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 IQSEC2Q5JU85 1478 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.77□□□□□ -1.17
NOD1-203ENST00000413433 RHOQP17081 205 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 MSX1P28360 303 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 PLEKHG4Q58EX7 1191 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 CCDC81Q6ZN84 652 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 SH3TC2Q8TF17 1288 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 APPBP2Q92624 585 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 ZNF837Q96EG3 531 aaPredicted RBP7.77□□□□□ -1.17
NOD1-203ENST00000413433 KRTAP9-2Q9BYQ4 174 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 PCDH12Q9NPG4 1184 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 KCNQ5Q9NR82 932 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 FANCLQ9NW38 375 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 TLR6Q9Y2C9 796 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 EHBP1L1Q8N3D4 1523 aa7.77□□□□□ -1.17
NOD1-203ENST00000413433 CCDC141Q6ZP82 1450 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 FAM221BA6H8Z2 402 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 GRNP28799 593 aaKnown RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 LMNB2Q03252 620 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 CAMK2GQ13555 558 aaPredicted RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 PEAR1Q5VY43 1037 aaPredicted RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 DIEXFQ68CQ4 756 aaKnown RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 NCAPG2Q86XI2 1143 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 RRP7BPQ9NSQ0 103 aa7.76□□□□□ -1.17
NOD1-203ENST00000413433 DNMT1P26358 1616 aaKnown RBP7.76□□□□□ -1.17
NOD1-203ENST00000413433 SHANK2Q9UPX8 1470 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 GREM1O60565 184 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 SASH3O75995 380 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 CELA3AP09093 270 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 LTKP29376 864 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 FBXW10Q5XX13 1052 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 ALYREFQ86V81 257 aaKnown RBP7.75□□□□□ -1.17
NOD1-203ENST00000413433 HOMER1Q86YM7 354 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 FERD3LQ96RJ6 166 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 CRBNQ96SW2 442 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 PZPP20742 1482 aa7.75□□□□□ -1.17
NOD1-203ENST00000413433 TRIM37O94972 964 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 RARAP10276 462 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 MCM4P33991 863 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 EIF6P56537 245 aaKnown RBP7.74□□□□□ -1.17
NOD1-203ENST00000413433 SEZ6Q53EL9 994 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 TTBK2Q6IQ55 1244 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 OR13H1Q8NG92 308 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 ACDQ96AP0 544 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 CCDC113Q9H0I3 377 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 GPAMQ9HCL2 828 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 ACTR10Q9NZ32 417 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 PPT2Q9UMR5 302 aa7.74□□□□□ -1.17
NOD1-203ENST00000413433 NSFL1CQ9UNZ2 370 aaKnown RBP7.74□□□□□ -1.17
NOD1-203ENST00000413433 NPHP4O75161 1426 aaPredicted RBP7.74□□□□□ -1.17
NOD1-203ENST00000413433 ADGBQ8N7X0 1667 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 KDM5DQ9BY66 1539 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 GPR25O00155 361 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 MMP20O60882 483 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 GARTP22102 1010 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 GRIN2CQ14957 1233 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 ARSHQ5FYA8 562 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 FAM196AQ6ZSG2 479 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 SLITRK4Q8IW52 837 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 TRPM4Q8TD43 1214 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 SHDQ96IW2 340 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 DNAJC7Q99615 494 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 OSMRQ99650 979 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 SALL4Q9UJQ4 1053 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 ZNF142P52746 1687 aaPredicted RBP7.73□□□□□ -1.17
NOD1-203ENST00000413433 FAM135AQ9P2D6 1515 aa7.73□□□□□ -1.17
NOD1-203ENST00000413433 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 NEURL4Q96JN8 1562 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 UGGT1Q9NYU2 1555 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 KRBA1A5PL33 1030 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 TLR3O15455 904 aaKnown RBP7.72□□□□□ -1.17
NOD1-203ENST00000413433 PSAPP07602 524 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 CRKP46108 304 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 CCINQ13939 588 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 CCDC181Q5TID7 509 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 CCNJLQ8IV13 435 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
NOD1-203ENST00000413433 TCF12Q99081 682 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms