RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HDAC5Q9UQL6 1122 aa20.44■□□□□ 0.86
SCAMP4-203ENST00000411971 EN2P19622 333 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 BTDP43251 543 aa20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 GPAT2Q6NUI2 795 aa20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 C17orf99Q6UX52 265 aa20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 CCDC84Q86UT8 332 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 FAM163AQ96GL9 167 aaPredicted RBP20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 CPA4Q9UI42 421 aa20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 MROH7-TTC4A0A0A0MT08 1334 aa20.43■□□□□ 0.86
SCAMP4-203ENST00000411971 ATAD5Q96QE3 1844 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 ENTPD3O75355 529 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 RLBP1P12271 317 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 MCAMP43121 646 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 MAP3K10Q02779 954 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 POLA2Q14181 598 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 DZIP1Q86YF9 867 aaKnown RBP20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 ZNF333Q96JL9 665 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 C1orf115Q9H7X2 142 aa20.42■□□□□ 0.86
SCAMP4-203ENST00000411971 GPR75-ASB3A0A0A6YYF3 556 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 FAM196BA6NMK8 535 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 PDHXO00330 501 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 ARID4AP29374 1257 aaPredicted RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 LACTBP83111 547 aaPredicted RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 PICALMQ13492 652 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 MVPQ14764 893 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 ANKRD23Q86SG2 305 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 ZGPATQ8N5A5 531 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 NSUN4Q96CB9 384 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 ZCCHC17Q9NP64 241 aaKnown RBP20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 AKAP2Q9Y2D5 859 aa20.41■□□□□ 0.86
SCAMP4-203ENST00000411971 PRPF38BQ5VTL8 546 aaKnown RBP20.4■□□□□ 0.86
SCAMP4-203ENST00000411971 SPATA5Q8NB90 893 aa20.4■□□□□ 0.86
SCAMP4-203ENST00000411971 DOCK3Q8IZD9 2030 aa20.39■□□□□ 0.86
SCAMP4-203ENST00000411971 MYCP01106 439 aaPredicted RBP20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 PTPRAP18433 802 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 HNRNPUQ00839 825 aaKnown RBP eCLIP20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 RRP1BQ14684 758 aaKnown RBP20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 ERICH6Q7L0X2 663 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 SH3TC2Q8TF17 1288 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 TRIM47Q96LD4 638 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
SCAMP4-203ENST00000411971 CYP2C8P10632 490 aa20.38■□□□□ 0.85
SCAMP4-203ENST00000411971 SCYL3Q8IZE3 742 aa20.38■□□□□ 0.85
SCAMP4-203ENST00000411971 SNRKQ9NRH2 765 aa20.38■□□□□ 0.85
SCAMP4-203ENST00000411971 FOCADQ5VW36 1801 aa20.38■□□□□ 0.85
SCAMP4-203ENST00000411971 G3BP1Q13283 466 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 ZSCAN29Q8IWY8 852 aaPredicted RBP20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 SSH3Q8TE77 659 aa20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 AFG3L2Q9Y4W6 797 aa20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 ZHX2Q9Y6X8 837 aa20.37■□□□□ 0.85
SCAMP4-203ENST00000411971 A0A0G2JLL6 359 aaPredicted RBP20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 SLC9C1Q4G0N8 1177 aa20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 PRRT2Q7Z6L0 340 aaPredicted RBP20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 ADGRA1Q86SQ6 560 aa20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
SCAMP4-203ENST00000411971 CXCL11O14625 94 aa20.35■□□□□ 0.85
SCAMP4-203ENST00000411971 BCRP11274 1271 aa20.35■□□□□ 0.85
SCAMP4-203ENST00000411971 TLR7Q9NYK1 1049 aaKnown RBP20.35■□□□□ 0.85
SCAMP4-203ENST00000411971 LOC285556D6RIA3 1793 aa20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 OSBPP22059 807 aa20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 PSMC4P43686 418 aa20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 GORABQ5T7V8 394 aa20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 SH3RF3Q8TEJ3 882 aaPredicted RBP20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 RAI14Q9P0K7 980 aa20.34■□□□□ 0.85
SCAMP4-203ENST00000411971 MTFR1Q15390 333 aa20.33■□□□□ 0.85
SCAMP4-203ENST00000411971 SLF2Q8IX21 1173 aa20.33■□□□□ 0.85
SCAMP4-203ENST00000411971 CTNND1O60716 968 aaKnown RBP20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 CYP2E1P05181 493 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 JAG1P78504 1218 aa20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 SHROOM1Q2M3G4 852 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 GADL1Q6ZQY3 521 aa20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 GPR108Q9NPR9 543 aa20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 PICK1Q9NRD5 415 aa20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 SRRDQ9UH36 339 aa20.32■□□□□ 0.84
SCAMP4-203ENST00000411971 COL2A1P02458 1487 aaPredicted RBP20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 TBC1D12O60347 775 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 NPM3O75607 178 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 SURF6O75683 361 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 ZAP70P43403 619 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 TREML2Q5T2D2 321 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 SHISA4Q96DD7 197 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 PIH1D3Q9NQM4 214 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 DBNLQ9UJU6 430 aaKnown RBP20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 GABRQQ9UN88 632 aa20.31■□□□□ 0.84
SCAMP4-203ENST00000411971 UQCRFS1P1P0C7P4 283 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 KIF22Q14807 665 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 ARHGEF6Q15052 776 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 EAF2Q96CJ1 260 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 CCDC8Q9H0W5 538 aaPredicted RBP20.3■□□□□ 0.84
SCAMP4-203ENST00000411971 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms