RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 GSTO1P78417 241 aa27.45■■□□□ 1.98
MSH6-202ENST00000411819 TTC39AQ5SRH9 613 aa27.45■■□□□ 1.98
MSH6-202ENST00000411819 NOL9Q5SY16 702 aaKnown RBP27.45■■□□□ 1.98
MSH6-202ENST00000411819 ZNF384Q8TF68 577 aa27.45■■□□□ 1.98
MSH6-202ENST00000411819 PTPN22Q9Y2R2 807 aa27.45■■□□□ 1.98
MSH6-202ENST00000411819 MAST2Q6P0Q8 1798 aa27.45■■□□□ 1.98
MSH6-202ENST00000411819 NSUN4Q96CB9 384 aaKnown RBP27.44■■□□□ 1.98
MSH6-202ENST00000411819 ZCCHC17Q9NP64 241 aaKnown RBP27.44■■□□□ 1.98
MSH6-202ENST00000411819 GPR108Q9NPR9 543 aa27.44■■□□□ 1.98
MSH6-202ENST00000411819 LRP2BPQ9P2M1 347 aa27.44■■□□□ 1.98
MSH6-202ENST00000411819 GPR75-ASB3A0A0A6YYF3 556 aa27.43■■□□□ 1.98
MSH6-202ENST00000411819 DDTLA6NHG4 134 aaPredicted RBP27.43■■□□□ 1.98
MSH6-202ENST00000411819 ZBTB7BO15156 539 aaPredicted RBP27.43■■□□□ 1.98
MSH6-202ENST00000411819 LDHCP07864 332 aa27.43■■□□□ 1.98
MSH6-202ENST00000411819 SH3BP5LQ7L8J4 393 aa27.43■■□□□ 1.98
MSH6-202ENST00000411819 DBNDD2Q9BQY9 259 aa27.43■■□□□ 1.98
MSH6-202ENST00000411819 DOCK1Q14185 1865 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 TLR2O60603 784 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 CAP1Q01518 475 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 CCDC158Q5M9N0 1113 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 SNRKQ9NRH2 765 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 KCNH4Q9UQ05 1017 aa27.42■■□□□ 1.98
MSH6-202ENST00000411819 ZSWIM8A7E2V4 1837 aa27.41■■□□□ 1.98
MSH6-202ENST00000411819 RHBDL3P58872 404 aa27.41■■□□□ 1.98
MSH6-202ENST00000411819 ARHGEF6Q15052 776 aa27.41■■□□□ 1.98
MSH6-202ENST00000411819 PICK1Q9NRD5 415 aa27.41■■□□□ 1.98
MSH6-202ENST00000411819 SCYL3Q8IZE3 742 aa27.4■■□□□ 1.98
MSH6-202ENST00000411819 PANK1Q8TE04 598 aa27.4■■□□□ 1.98
MSH6-202ENST00000411819 PDE4DIPQ5VU43 2346 aa27.4■■□□□ 1.98
MSH6-202ENST00000411819 PHF20L1A8MW92 1017 aa27.39■■□□□ 1.98
MSH6-202ENST00000411819 SLURP2P0DP57 97 aa27.39■■□□□ 1.98
MSH6-202ENST00000411819 ANKRD23Q86SG2 305 aa27.39■■□□□ 1.98
MSH6-202ENST00000411819 NOL10Q9BSC4 688 aaKnown RBP27.39■■□□□ 1.98
MSH6-202ENST00000411819 PDHXO00330 501 aa27.38■■□□□ 1.97
MSH6-202ENST00000411819 KIF22Q14807 665 aa27.38■■□□□ 1.97
MSH6-202ENST00000411819 NOP58Q9Y2X3 529 aaKnown RBP27.38■■□□□ 1.97
MSH6-202ENST00000411819 ECM2O94769 699 aaPredicted RBP27.37■■□□□ 1.97
MSH6-202ENST00000411819 CEP85Q6P2H3 762 aa27.37■■□□□ 1.97
MSH6-202ENST00000411819 TEX11Q8IYF3 940 aa27.37■■□□□ 1.97
MSH6-202ENST00000411819 MYO5AQ9Y4I1 1855 aaKnown RBP27.37■■□□□ 1.97
MSH6-202ENST00000411819 ZHX2Q9Y6X8 837 aa27.37■■□□□ 1.97
MSH6-202ENST00000411819 HTTP42858 3142 aa27.36■■□□□ 1.97
MSH6-202ENST00000411819 MAP4K4O95819 1239 aaPredicted RBP27.36■■□□□ 1.97
MSH6-202ENST00000411819 LACTBP83111 547 aaPredicted RBP27.36■■□□□ 1.97
MSH6-202ENST00000411819 NAA16Q6N069 864 aaPredicted RBP27.36■■□□□ 1.97
MSH6-202ENST00000411819 TLR7Q9NYK1 1049 aaKnown RBP27.36■■□□□ 1.97
MSH6-202ENST00000411819 CPA4Q9UI42 421 aa27.36■■□□□ 1.97
MSH6-202ENST00000411819 TNRC18O15417 2968 aaPredicted RBP27.36■■□□□ 1.97
MSH6-202ENST00000411819 FAM196BA6NMK8 535 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 CXCL11O14625 94 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 PTPRAP18433 802 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 ARHGAP39Q9C0H5 1083 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 CCDC8Q9H0W5 538 aaPredicted RBP27.35■■□□□ 1.97
MSH6-202ENST00000411819 OSBPL5Q9H0X9 879 aaPredicted RBP27.35■■□□□ 1.97
MSH6-202ENST00000411819 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.35■■□□□ 1.97
MSH6-202ENST00000411819 DBNLQ9UJU6 430 aaKnown RBP27.35■■□□□ 1.97
MSH6-202ENST00000411819 PTCH2Q9Y6C5 1203 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 PTPRFP10586 1907 aa27.35■■□□□ 1.97
MSH6-202ENST00000411819 COL2A1P02458 1487 aaPredicted RBP27.34■■□□□ 1.97
MSH6-202ENST00000411819 CTNND1O60716 968 aaKnown RBP27.34■■□□□ 1.97
MSH6-202ENST00000411819 NPM3O75607 178 aaKnown RBP27.34■■□□□ 1.97
MSH6-202ENST00000411819 MAP3K10Q02779 954 aa27.34■■□□□ 1.97
MSH6-202ENST00000411819 MOGSQ13724 837 aa27.34■■□□□ 1.97
MSH6-202ENST00000411819 AATFQ9NY61 560 aaKnown RBP eCLIP27.34■■□□□ 1.97
MSH6-202ENST00000411819 PHIPQ8WWQ0 1821 aa27.34■■□□□ 1.97
MSH6-202ENST00000411819 RBBP6Q7Z6E9 1792 aaKnown RBP27.33■■□□□ 1.97
MSH6-202ENST00000411819 ATAD5Q96QE3 1844 aa27.33■■□□□ 1.97
MSH6-202ENST00000411819 CYP2E1P05181 493 aaPredicted RBP27.33■■□□□ 1.97
MSH6-202ENST00000411819 ZAP70P43403 619 aa27.33■■□□□ 1.97
MSH6-202ENST00000411819 SLC9C1Q4G0N8 1177 aa27.33■■□□□ 1.97
MSH6-202ENST00000411819 GADL1Q6ZQY3 521 aa27.33■■□□□ 1.97
MSH6-202ENST00000411819 SH3RF3Q8TEJ3 882 aaPredicted RBP27.33■■□□□ 1.97
MSH6-202ENST00000411819 PARK7Q99497 189 aaKnown RBP27.33■■□□□ 1.97
MSH6-202ENST00000411819 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.33■■□□□ 1.97
MSH6-202ENST00000411819 EXOC6BQ9Y2D4 811 aa27.33■■□□□ 1.97
MSH6-202ENST00000411819 BAG3O95817 575 aa27.32■■□□□ 1.96
MSH6-202ENST00000411819 MS4A1P11836 297 aa27.32■■□□□ 1.96
MSH6-202ENST00000411819 C17orf99Q6UX52 265 aa27.32■■□□□ 1.96
MSH6-202ENST00000411819 ARMC5Q96C12 935 aa27.32■■□□□ 1.96
MSH6-202ENST00000411819 EAF2Q96CJ1 260 aaPredicted RBP27.32■■□□□ 1.96
MSH6-202ENST00000411819 ZNF512BQ96KM6 892 aaPredicted RBP27.32■■□□□ 1.96
MSH6-202ENST00000411819 CDK5RAP2Q96SN8 1893 aa27.32■■□□□ 1.96
MSH6-202ENST00000411819 A0A0G2JLL6 359 aaPredicted RBP27.31■■□□□ 1.96
MSH6-202ENST00000411819 POTEFA5A3E0 1075 aa27.31■■□□□ 1.96
MSH6-202ENST00000411819 FASTKD5Q7L8L6 764 aaKnown RBP27.31■■□□□ 1.96
MSH6-202ENST00000411819 PRRT2Q7Z6L0 340 aaPredicted RBP27.31■■□□□ 1.96
MSH6-202ENST00000411819 CCDC84Q86UT8 332 aaPredicted RBP27.31■■□□□ 1.96
MSH6-202ENST00000411819 AFG3L2Q9Y4W6 797 aa27.31■■□□□ 1.96
MSH6-202ENST00000411819 TRIM75PA6NK02 468 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 TBC1D12O60347 775 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 PLCG2P16885 1265 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 GPAT2Q6NUI2 795 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 ERC1Q8IUD2 1116 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 PIH1D3Q9NQM4 214 aaKnown RBP27.3■■□□□ 1.96
MSH6-202ENST00000411819 ADGRA2Q96PE1 1338 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 FOCADQ5VW36 1801 aa27.3■■□□□ 1.96
MSH6-202ENST00000411819 KIAA0100Q14667 2235 aaKnown RBP27.29■■□□□ 1.96
MSH6-202ENST00000411819 CYP2C8P10632 490 aa27.29■■□□□ 1.96
MSH6-202ENST00000411819 ADGRA1Q86SQ6 560 aa27.29■■□□□ 1.96
MSH6-202ENST00000411819 NBPF11Q86T75 865 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms