RNA–Protein interactions for RNA: ENST00000410660.1

RNU6-887P-201, Transcript of RNA, U6 small nuclear 887, pseudogene, humanhuman

BASIC

Gene RNU6-887P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-887P-201ENST00000410660 SYNGAP1Q96PV0 1343 aa2.31□□□□□ -2.04
RNU6-887P-201ENST00000410660 IGF2BP3O00425 579 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 TNFRSF10BO14763 440 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 PEX10O60683 326 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 PI3P19957 117 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 ERVFC1P60507 584 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 PTK7Q13308 1070 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 FKBP5Q13451 457 aaPredicted RBP2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZNF438Q7Z4V0 828 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 SP8Q8IXZ3 490 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 PANK1Q8TE04 598 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 DACT3Q96B18 629 aaPredicted RBP2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 FANCD2OSQ96PS1 177 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 SGPP1Q9BX95 441 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 CHRDQ9H2X0 955 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 ATP13A1Q9HD20 1204 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 PALD1Q9ULE6 856 aa2.3□□□□□ -2.04
RNU6-887P-201ENST00000410660 TEX51A0A1B0GUA7 166 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 METTL12A8MUP2 240 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 PRICKLE3O43900 615 aaPredicted RBP2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 RAC2P15153 192 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 AFF3P51826 1226 aaKnown RBP2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 RTP5Q14D33 572 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZNF423Q2M1K9 1284 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 FRMD5Q7Z6J6 570 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 TTC6Q86TZ1 520 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 NPAS4Q8IUM7 802 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 MYLIPQ8WY64 445 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 CCDC120Q96HB5 630 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 ALPK1Q96QP1 1244 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 CORO1BQ9BR76 489 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 ATXN3LQ9H3M9 355 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZFYVE1Q9HBF4 777 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 GTF2IRD1Q9UHL9 959 aa2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 CNOT11Q9UKZ1 510 aaKnown RBP2.29□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZBTB39O15060 712 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 HPXP02790 462 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 MAGEA10P43363 369 aaPredicted RBP2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 ADAM17P78536 824 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 PCDH1Q08174 1060 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 PDE3AQ14432 1141 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 TTLL4Q14679 1199 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZNF827Q17R98 1081 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 VMACQ2NL98 169 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 C16orf46Q6P387 395 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 LARP1Q6PKG0 1096 aaKnown RBP2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 ZNF605Q86T29 641 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 IRF2BP1Q8IU81 584 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 ANKMY2Q8IV38 441 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 WDR89Q96FK6 387 aaPredicted RBP2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 HSPA12BQ96MM6 686 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 RNF32Q9H0A6 362 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 DISC1Q9NRI5 854 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 PCOLCE2Q9UKZ9 415 aa2.28□□□□□ -2.04
RNU6-887P-201ENST00000410660 USP17L15C9J2P7 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L10C9JJH3 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L13C9JLJ4 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L12C9JPN9 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L11C9JVI0 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L21D6R901 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L18D6R9N7 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L22D6RA61 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L17D6RBQ6 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L19D6RCP7 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L20D6RJB6 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 K7ESM1 405 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 RNGTTO60942 597 aaKnown RBP2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 NEFMP07197 916 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 C6P13671 934 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 HCLS1P14317 486 aaPredicted RBP2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 ID3Q02535 119 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 USP17L24Q0WX57 530 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 RALGPS1Q5JS13 557 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 XKR5Q6UX68 686 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 ZFPM1Q8IX07 1006 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 NUDT16Q96DE0 195 aaKnown RBP2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 ARXQ96QS3 562 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 CLEC4MQ9H2X3 399 aaPredicted RBP2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 LUC7LQ9NQ29 371 aaKnown RBP2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 SLAMF8Q9P0V8 285 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 COG6Q9Y2V7 657 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 PCDHGC5Q9Y5F6 944 aa2.27□□□□□ -2.05
RNU6-887P-201ENST00000410660 DNAJC25-GNG10A0A024R161 153 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 POM121CA8CG34 1229 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 GNAT3A8MTJ3 354 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 C1QTNF3-AMACRE9PGA6 284 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 EREGO14944 169 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 CILPO75339 1184 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 LIG1P18858 919 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 TRHRP34981 398 aaPredicted RBP2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 GDF5P43026 501 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 PEAR1Q5VY43 1037 aaPredicted RBP2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 TMEM132EQ6IEE7 984 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 Q8N1X5 172 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 SIGLEC10Q96LC7 697 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 SLC6A17Q9H1V8 727 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 DNAJC25Q9H1X3 360 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 ZNF552Q9H707 407 aaPredicted RBP2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 SP110Q9HB58 689 aa2.26□□□□□ -2.05
RNU6-887P-201ENST00000410660 EPB41L4AQ9HCS5 686 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms