RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HDAC1Q13547 482 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-206ENST00000409141 WNK4Q96J92 1243 aa21.8■■□□□ 1.08
PDLIM2-206ENST00000409141 WRNIP1Q96S55 665 aa21.8■■□□□ 1.08
PDLIM2-206ENST00000409141 ECHDC1Q9NTX5 307 aa21.8■■□□□ 1.08
PDLIM2-206ENST00000409141 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 LBX1P52954 281 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 VGLL4Q14135 290 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 TMED8Q6PL24 325 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 SH3BP5LQ7L8J4 393 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 EDC3Q96F86 508 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 GPATCH3Q96I76 525 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 HAUS7Q99871 368 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 PAG1Q9NWQ8 432 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 ZBTB47Q9UFB7 747 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 AK9Q5TCS8 1911 aa21.79■■□□□ 1.08
PDLIM2-206ENST00000409141 MYO5AQ9Y4I1 1855 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 DDTLA6NHG4 134 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 ZBTB48P10074 688 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 HSPA8P11142 646 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 SLC9C2Q5TAH2 1124 aa21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 ZKSCAN4Q969J2 545 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 TSKSQ9UJT2 592 aa21.78■■□□□ 1.08
PDLIM2-206ENST00000409141 DYNLL1P63167 89 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-206ENST00000409141 MIGA1Q8NAN2 632 aa21.77■■□□□ 1.08
PDLIM2-206ENST00000409141 GCC1Q96CN9 775 aa21.77■■□□□ 1.08
PDLIM2-206ENST00000409141 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
PDLIM2-206ENST00000409141 TRPA1O75762 1119 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 TM4SF4P48230 202 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 SREBF2Q12772 1141 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 ANKRD45Q5TZF3 282 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 TGFBRAP1Q8WUH2 860 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 OPTNQ96CV9 577 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 OSBPL5Q9H0X9 879 aaPredicted RBP21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 RNF186Q9NXI6 227 aa21.77■■□□□ 1.07
PDLIM2-206ENST00000409141 MAST2Q6P0Q8 1798 aa21.76■■□□□ 1.07
PDLIM2-206ENST00000409141 PDE6AP16499 860 aa21.76■■□□□ 1.07
PDLIM2-206ENST00000409141 ZNF112Q9UJU3 913 aa21.76■■□□□ 1.07
PDLIM2-206ENST00000409141 MANSC4A6NHS7 340 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 INPP5BP32019 993 aa21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 GJA5P36382 358 aa21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 COL13A1Q5TAT6 717 aaPredicted RBP21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 CERS3Q8IU89 383 aa21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 MAPKAPK5Q8IW41 473 aa21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 PRDM10Q9NQV6 1147 aa21.75■■□□□ 1.07
PDLIM2-206ENST00000409141 INHBEP58166 350 aa21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 IRX6P78412 446 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 TSHZ3Q63HK5 1081 aa21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 CNKSR2Q8WXI2 1034 aa21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 SAGE1Q9NXZ1 904 aa21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 SNCAIPQ9Y6H5 919 aa21.74■■□□□ 1.07
PDLIM2-206ENST00000409141 ZNF532Q9HCE3 1301 aa21.73■■□□□ 1.07
PDLIM2-206ENST00000409141 OTUD5Q96G74 571 aa21.73■■□□□ 1.07
PDLIM2-206ENST00000409141 ATRNL1Q5VV63 1379 aa21.73■■□□□ 1.07
PDLIM2-206ENST00000409141 MAGEB6P1A0A0J9YX57 407 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 MAP3K10Q02779 954 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 ERO1BQ86YB8 467 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 OTUD7AQ8TE49 926 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 DHX36Q9H2U1 1008 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 DOCK2Q92608 1830 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 OTOFQ9HC10 1997 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 FLT1P17948 1338 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 TTC41PQ6P2S7 1318 aa21.72■■□□□ 1.07
PDLIM2-206ENST00000409141 TCRBV5S4A2TA0A5A2 114 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 SPDYE5A6NIY4 337 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 SLURP2P0DP57 97 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 USP5P45974 858 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 COL2A1P02458 1487 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 PHF20L1A8MW92 1017 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 ERC2O15083 957 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 TBC1D12O60347 775 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 IGHDP01880 384 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 ADD2P35612 726 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 RIOK1Q9BRS2 568 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 PI4KBQ9UBF8 816 aa21.71■■□□□ 1.07
PDLIM2-206ENST00000409141 MX1P20591 662 aa21.7■■□□□ 1.06
PDLIM2-206ENST00000409141 NOL9Q5SY16 702 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-206ENST00000409141 ZSCAN25Q6NSZ9 544 aa21.7■■□□□ 1.06
PDLIM2-206ENST00000409141 SAP30BPQ9UHR5 308 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-206ENST00000409141 PALD1Q9ULE6 856 aa21.7■■□□□ 1.06
PDLIM2-206ENST00000409141 FAM196BA6NMK8 535 aa21.69■■□□□ 1.06
PDLIM2-206ENST00000409141 GTF2A2P52657 109 aa21.69■■□□□ 1.06
PDLIM2-206ENST00000409141 PPATQ06203 517 aa21.69■■□□□ 1.06
PDLIM2-206ENST00000409141 IFNL1Q8IU54 200 aa21.69■■□□□ 1.06
PDLIM2-206ENST00000409141 IRF6O14896 467 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 CTNND1O60716 968 aaKnown RBP21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 GLRX3O76003 335 aaKnown RBP21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 TBC1D8O95759 1140 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 ALDH1A1P00352 501 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 PPIL2Q13356 520 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 SLFNL1Q499Z3 407 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 OTUD7BQ6GQQ9 843 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 B4GALNT3Q6L9W6 998 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 SCYL3Q8IZE3 742 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 MS4A4AQ96JQ5 239 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 CRNKL1Q9BZJ0 848 aaKnown RBP21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 PICK1Q9NRD5 415 aa21.68■■□□□ 1.06
PDLIM2-206ENST00000409141 TESPA1A2RU30 521 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms