RNA–Protein interactions for RNA: ENST00000408378.1

MIR548I3-201, Transcript of microRNA 548i-3, humanhuman

BASIC

Gene MIR548I3, Length 149 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548I3-201ENST00000408378 LATS2Q9NRM7 1088 aa4.93□□□□□ -1.62
MIR548I3-201ENST00000408378 EIF4EBP3O60516 100 aaPredicted RBP4.92□□□□□ -1.62
MIR548I3-201ENST00000408378 LIG1P18858 919 aa4.92□□□□□ -1.62
MIR548I3-201ENST00000408378 BAHD1Q8TBE0 780 aaPredicted RBP4.92□□□□□ -1.62
MIR548I3-201ENST00000408378 FANCD2OSQ96PS1 177 aa4.92□□□□□ -1.62
MIR548I3-201ENST00000408378 TRIM56Q9BRZ2 755 aaKnown RBP4.92□□□□□ -1.62
MIR548I3-201ENST00000408378 TTLL4Q14679 1199 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 NKPD1Q17RQ9 610 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 FAM200AQ8TCP9 573 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 PMEPA1Q969W9 287 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 ATXN3LQ9H3M9 355 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 VRTNQ9H8Y1 702 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 SSU72Q9NP77 194 aaKnown RBP4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 STIM2Q9P246 746 aa4.91□□□□□ -1.62
MIR548I3-201ENST00000408378 RAD21O60216 631 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 EDN3P14138 238 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 DLG4P78352 724 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 SPATS1Q496A3 300 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 EDEM1Q92611 657 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 WDR89Q96FK6 387 aaPredicted RBP4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 GPR20Q99678 358 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 ZC3H12CQ9C0D7 883 aaKnown RBP4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 CLEC4MQ9H2X3 399 aaPredicted RBP4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 ATP13A1Q9HD20 1204 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 SEMA3GQ9NS98 782 aa4.9□□□□□ -1.63
MIR548I3-201ENST00000408378 RAC2P15153 192 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 ERVFC1P60507 584 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 DNM1Q05193 864 aaKnown RBP4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 ABTB2Q8N961 1025 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 TTC16Q8NEE8 873 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 MCOLN1Q9GZU1 580 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 ADAM7Q9H2U9 754 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 GGNBP2Q9H3C7 697 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 GTF2IRD1Q9UHL9 959 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 PCOLCE2Q9UKZ9 415 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 KCTD3Q9Y597 815 aa4.89□□□□□ -1.63
MIR548I3-201ENST00000408378 A0A096LPE4 126 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 A0A1W2PPZ6 126 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 GNAT3A8MTJ3 354 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 ID3Q02535 119 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 PLP2Q04941 152 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 SPRED3Q2MJR0 410 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 TMEM132EQ6IEE7 984 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 TTC6Q86TZ1 520 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 DISC1Q9NRI5 854 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 SLAMF8Q9P0V8 285 aa4.88□□□□□ -1.63
MIR548I3-201ENST00000408378 RFXAPO00287 272 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 PHACTR2O75167 634 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 SRFP11831 508 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 CLCN7P51798 805 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 ZXDAP98168 799 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 XKR5Q6UX68 686 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 ZNF605Q86T29 641 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 BDH2Q9BUT1 245 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 SGPP1Q9BX95 441 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 SRRDQ9UH36 339 aa4.87□□□□□ -1.63
MIR548I3-201ENST00000408378 LMOD1P29536 600 aaPredicted RBP4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 EFEMP1Q12805 493 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 SSPNQ14714 243 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 CDKAL1Q5VV42 579 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 PEAR1Q5VY43 1037 aaPredicted RBP4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 NPAS4Q8IUM7 802 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 DDX54Q8TDD1 881 aaKnown RBP4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 MYLIPQ8WY64 445 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 HSPA12BQ96MM6 686 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 ALPK1Q96QP1 1244 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 MYRFQ9Y2G1 1151 aa4.86□□□□□ -1.63
MIR548I3-201ENST00000408378 GRIN3BO60391 1043 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 FSHBP01225 129 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 RPLP1P05386 114 aaKnown RBP4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 SLFN14P0C7P3 912 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 PCSK2P16519 638 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 TRHRP34981 398 aaPredicted RBP4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 HK2P52789 917 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 VMACQ2NL98 169 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 FAM214BQ7L5A3 538 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 TMEM151BQ8IW70 566 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 SYT8Q8NBV8 401 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 GLMNQ92990 594 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 ISL2Q96A47 359 aa4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 FOXD3Q9UJU5 478 aaPredicted RBP4.85□□□□□ -1.63
MIR548I3-201ENST00000408378 MYOCOSA0A1B0GUC4 107 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 H3BS24 57 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 NEFMP07197 916 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 GRIA4P48058 902 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 CDCA8Q53HL2 280 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 SLC16A11Q8NCK7 471 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 PANK1Q8TE04 598 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 CCDC120Q96HB5 630 aa4.84□□□□□ -1.63
MIR548I3-201ENST00000408378 FAM155AB1AL88 458 aaPredicted RBP4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 IGF2BP3O00425 579 aaKnown RBP eCLIP4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 POLR3DP05423 398 aaPredicted RBP4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 PI3P19957 117 aa4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 OCLNQ16625 522 aa4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 PPP1R12CQ9BZL4 782 aa4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 RNF32Q9H0A6 362 aa4.83□□□□□ -1.64
MIR548I3-201ENST00000408378 SYNGAP1Q96PV0 1343 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms