RNA–Protein interactions for RNA: ENST00000405262.6

TNFSF11-204, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-204ENST00000405262 SGSM3Q96HU1 749 aa11.15□□□□□ -0.62
TNFSF11-204ENST00000405262 IL1RAPL2Q9NP60 686 aa11.15□□□□□ -0.62
TNFSF11-204ENST00000405262 CDHR2Q9BYE9 1310 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 MAP4K4O95819 1239 aaPredicted RBP11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 KRT32Q14532 448 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 F6X3S4 739 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 SLC3A2P08195 630 aaKnown RBP11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 NF2P35240 595 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 AMPHP49418 695 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 WLSQ5T9L3 541 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 FBXW10Q5XX13 1052 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 B4GALNT4Q76KP1 1039 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 EVI5LQ96CN4 794 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 GPATCH3Q96I76 525 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 FAXDC2Q96IV6 333 aa11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
TNFSF11-204ENST00000405262 SYF2O95926 243 aaKnown RBP11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 SERPINC1P01008 464 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 FBLN1P23142 703 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 VSNL1P62760 191 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 MYL5Q02045 173 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 DCTN1Q14203 1278 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 PLCB4Q15147 1175 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 G2E3Q7L622 706 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 FAM177A1Q8N128 213 aaPredicted RBP11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 STK31Q9BXU1 1019 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 NLRP2Q9NX02 1062 aa11.13□□□□□ -0.63
TNFSF11-204ENST00000405262 CTAGE15A4D2H0 777 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 LRRIQ3A6PVS8 624 aaPredicted RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 KIF5CO60282 957 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CCDC175P0C221 793 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 UBTFL1P0CB47 393 aaPredicted RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CTAGE8P0CG41 777 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 ARHGAP25P42331 645 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 ME1P48163 572 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CCT5P48643 541 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 FNTAP49354 379 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CTAGE6Q86UF2 777 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 CTAGE4Q8IX94 777 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 FAM76AQ8TAV0 307 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 ANKRD24Q8TF21 1146 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 JPH2Q9BR39 696 aaPredicted RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 HSD3B7Q9H2F3 369 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 RTEL1Q9NZ71 1219 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 TNS2Q63HR2 1409 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 NEDD4P46934 1319 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 SURF6O75683 361 aaKnown RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 SCP2P22307 547 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 ZKSCAN8Q15776 578 aaPredicted RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 USP28Q96RU2 1077 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 PAGR1Q9BTK6 254 aa11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 FAM208AQ9UK61 1670 aaKnown RBP11.12□□□□□ -0.63
TNFSF11-204ENST00000405262 BCL9O00512 1426 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 A0A087WWV3 80 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 H0YHG0 523 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 SSR1P43307 286 aaKnown RBP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 IRAK1P51617 712 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 SARNPP82979 210 aaKnown RBP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 IGSF22Q8N9C0 903 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 MAGEC3Q8TD91 643 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 ZKSCAN4Q969J2 545 aaPredicted RBP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 CLIC6Q96NY7 704 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 MYO1AQ9UBC5 1043 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 RGPD3A6NKT7 1758 aaPredicted RBP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 RGPD4Q7Z3J3 1758 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 CTAGE9A4FU28 777 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 ANKRD33BA6NCL7 494 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 EIF3HO15372 352 aaKnown RBP eCLIP11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 JAK2O60674 1132 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 DTNBO60941 627 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 PHACTR2O75167 634 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 KIAA0754O94854 1291 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 YEATS4O95619 227 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 FLIIQ13045 1269 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 TOGARAM2Q6ZUX3 1019 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 MICALCLQ6ZW33 695 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 CCDC50Q8IVM0 306 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 IP6K1Q92551 441 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 COG3Q96JB2 828 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 PLEKHA4Q9H4M7 779 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 HPCAL4Q9UM19 191 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 PCDHA7Q9UN72 937 aa11.11□□□□□ -0.63
TNFSF11-204ENST00000405262 A0A1B0GUA9 196 aa11.1□□□□□ -0.63
TNFSF11-204ENST00000405262 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
TNFSF11-204ENST00000405262 TC2NQ8N9U0 490 aa11.1□□□□□ -0.63
TNFSF11-204ENST00000405262 N4BP2L2Q92802 583 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms