RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ADH5P11766 374 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 DNAJA1P31689 397 aaKnown RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 IREB2P48200 963 aaKnown RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 MPP2Q14168 576 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 MBTPS1Q14703 1052 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 ZC3H12AQ5D1E8 599 aaKnown RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 REC114Q7Z4M0 266 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 C12orf50Q8NA57 414 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 SMG8Q8ND04 991 aaKnown RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 NKD1Q969G9 470 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 CYP4F12Q9HCS2 524 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 GINM1Q9NU53 330 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 STK17AQ9UEE5 414 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 AP4E1Q9UPM8 1137 aa7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 POLR3KQ9Y2Y1 108 aaPredicted RBP7.88□□□□□ -1.15
HMGB3P19-201ENST00000403971 C9orf172C9J069 976 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 GFRA2O00451 464 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 GRIN3BO60391 1043 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 GLB1P16278 677 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 CHRNA4P43681 627 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 ID3Q02535 119 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 GNL2Q13823 731 aaKnown RBP7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 PPM1JQ5JR12 505 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 FDX2Q6P4F2 183 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 WFDC12Q8WWY7 111 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 ELMO3Q96BJ8 720 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 DCAF5Q96JK2 942 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 NACC1Q96RE7 527 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 LRRC3Q9BY71 257 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 SUGCTQ9HAC7 445 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 BRMS1Q9HCU9 246 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 CRIM1Q9NZV1 1036 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 HIF3AQ9Y2N7 669 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 DCAF1Q9Y4B6 1507 aa7.87□□□□□ -1.15
HMGB3P19-201ENST00000403971 ROBO2Q9HCK4 1378 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 PRAMEF27A3QJZ7 478 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 TIAF1O95411 115 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 MCM4P33991 863 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 PREPP48147 710 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 SOX4Q06945 474 aaPredicted RBP7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 ADGRE1Q14246 886 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 CWF19L2Q2TBE0 894 aaKnown RBP7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 DYMQ7RTS9 669 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 HDXQ7Z353 690 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 SLITRK4Q8IW52 837 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 CORINQ9Y5Q5 1042 aa7.86□□□□□ -1.15
HMGB3P19-201ENST00000403971 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 NASPP49321 788 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 HNRNPUQ00839 825 aaKnown RBP eCLIP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 NRG1Q02297 640 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 ANKRD34AQ69YU3 496 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 CYFIP1Q7L576 1253 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 CD163Q86VB7 1156 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 C2CD4AQ8NCU7 369 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 UBL7Q96S82 380 aaPredicted RBP7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 DISC1Q9NRI5 854 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 SNCAIPQ9Y6H5 919 aa7.85□□□□□ -1.15
HMGB3P19-201ENST00000403971 SYNGAP1Q96PV0 1343 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 RNF225M0QZC1 329 aaPredicted RBP7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 GSK3AP49840 483 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 ARID5AQ03989 594 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 CLCQ05315 142 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 Q6ZS46 218 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 GK5Q6ZS86 529 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 ALYREFQ86V81 257 aaKnown RBP7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
HMGB3P19-201ENST00000403971 MYO15BQ96JP2 1530 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 HCLS1P14317 486 aaPredicted RBP7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 ERVK-24P63145 666 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 RING1Q06587 406 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 TTLL4Q14679 1199 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 DIEXFQ68CQ4 756 aaKnown RBP7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 CCDC81Q6ZN84 652 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 UBE3DQ7Z6J8 389 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 VPS37DQ86XT2 251 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 MCF2L2Q86YR7 1114 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 PICK1Q9NRD5 415 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 PPT2Q9UMR5 302 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 PCDHB14Q9Y5E9 798 aa7.83□□□□□ -1.16
HMGB3P19-201ENST00000403971 SART1O43290 800 aaKnown RBP7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 NEFMP07197 916 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 FGRP09769 529 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 GRK4P32298 578 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 NTF4P34130 210 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 ASPAP45381 313 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 SOX9P48436 509 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 TXNRD3Q86VQ6 643 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 GMLQ99445 158 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 TANGO6Q9C0B7 1094 aa7.82□□□□□ -1.16
HMGB3P19-201ENST00000403971 RASSF7Q02833 373 aa7.81□□□□□ -1.16
HMGB3P19-201ENST00000403971 ZBTB37Q5TC79 503 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms