RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TOMM22Q9NS69 142 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 ARPP21Q9UBL0 812 aaPredicted RBP30.14■■■□□ 2.42
CPNE1-205ENST00000401607 SUGT1Q9Y2Z0 365 aa30.14■■■□□ 2.42
CPNE1-205ENST00000401607 GOLGA8BA8MQT2 603 aa30.13■■■□□ 2.41
CPNE1-205ENST00000401607 FGRP09769 529 aa30.13■■■□□ 2.41
CPNE1-205ENST00000401607 LARP1BQ659C4 914 aaKnown RBP30.13■■■□□ 2.41
CPNE1-205ENST00000401607 CC2D2BQ6DHV5 1058 aa30.13■■■□□ 2.41
CPNE1-205ENST00000401607 FBXW7Q969H0 707 aa30.13■■■□□ 2.41
CPNE1-205ENST00000401607 DBNDD1Q9H9R9 158 aa30.13■■■□□ 2.41
CPNE1-205ENST00000401607 G3V3G9 751 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 GOLGA6L22H0YM25 854 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 ZBTB7AO95365 584 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 F13A1P00488 732 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 TMEM67Q5HYA8 995 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 DCAF8Q5TAQ9 597 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 PODNQ7Z5L7 613 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 SGMS1Q86VZ5 419 aa30.12■■■□□ 2.41
CPNE1-205ENST00000401607 CDK5RAP2Q96SN8 1893 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 PTPDC1A2A3K4 754 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 CYP2D6P10635 497 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 PDCP20941 246 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 KCNA3P22001 575 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 LIFRP42702 1097 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 CERS3Q8IU89 383 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 SLF2Q8IX21 1173 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 NAV1Q8NEY1 1877 aa30.11■■■□□ 2.41
CPNE1-205ENST00000401607 IFIT3O14879 490 aaKnown RBP30.1■■■□□ 2.41
CPNE1-205ENST00000401607 TRAK2O60296 914 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 PCP11498 1178 aaKnown RBP30.1■■■□□ 2.41
CPNE1-205ENST00000401607 DPEP1P16444 411 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 PTMSP20962 102 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 USP5P45974 858 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 DDX11Q96FC9 970 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 MTA3Q9BTC8 594 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 MXD3Q9BW11 206 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.1■■■□□ 2.41
CPNE1-205ENST00000401607 ZNF646O15015 1829 aaPredicted RBP30.1■■■□□ 2.41
CPNE1-205ENST00000401607 C21orf2O43822 256 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 PDIA4P13667 645 aaKnown RBP30.1■■■□□ 2.41
CPNE1-205ENST00000401607 RAB11FIP4Q86YS3 637 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 TTLL6Q8N841 843 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 CHMP4CQ96CF2 233 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 MCM9Q9NXL9 1143 aa30.1■■■□□ 2.41
CPNE1-205ENST00000401607 VPS37CA5D8V6 355 aaPredicted RBP30.09■■■□□ 2.41
CPNE1-205ENST00000401607 USP17L8P0C7I0 530 aa30.09■■■□□ 2.41
CPNE1-205ENST00000401607 APOA5Q6Q788 366 aa30.09■■■□□ 2.41
CPNE1-205ENST00000401607 ESR2Q92731 530 aa30.09■■■□□ 2.41
CPNE1-205ENST00000401607 RHBDL3P58872 404 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 HMGN5P82970 282 aaKnown RBP30.08■■■□□ 2.41
CPNE1-205ENST00000401607 TGFBRAP1Q8WUH2 860 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 ZKSCAN3Q9BRR0 538 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 KCNQ5Q9NR82 932 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 DAGLAQ9Y4D2 1042 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 DDX60LQ5H9U9 1706 aaKnown RBP30.08■■■□□ 2.41
CPNE1-205ENST00000401607 ECE2O60344 883 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 CDC37L1Q7L3B6 337 aa30.08■■■□□ 2.41
CPNE1-205ENST00000401607 SCN9AQ15858 1988 aa30.07■■■□□ 2.4
CPNE1-205ENST00000401607 KIAA2012Q0VF49 1180 aa30.07■■■□□ 2.4
CPNE1-205ENST00000401607 LMBRD1Q9NUN5 540 aa30.07■■■□□ 2.4
CPNE1-205ENST00000401607 F8W031 263 aaPredicted RBP30.06■■■□□ 2.4
CPNE1-205ENST00000401607 ORC4O43929 436 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 PRDM1O75626 825 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 PLCG2P16885 1265 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 AOC3Q16853 763 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 C12orf60Q5U649 245 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 MTFR1LQ9H019 292 aa30.06■■■□□ 2.4
CPNE1-205ENST00000401607 TTF2Q9UNY4 1162 aaKnown RBP30.06■■■□□ 2.4
CPNE1-205ENST00000401607 ATF5Q9Y2D1 282 aaPredicted RBP30.06■■■□□ 2.4
CPNE1-205ENST00000401607 SART3Q15020 963 aaKnown RBP30.05■■■□□ 2.4
CPNE1-205ENST00000401607 NFXL1Q6ZNB6 911 aa30.05■■■□□ 2.4
CPNE1-205ENST00000401607 TEX11Q8IYF3 940 aa30.05■■■□□ 2.4
CPNE1-205ENST00000401607 SUPT20HQ8NEM7 779 aa30.05■■■□□ 2.4
CPNE1-205ENST00000401607 FOXD4L6Q3SYB3 417 aaPredicted RBP30.05■■■□□ 2.4
CPNE1-205ENST00000401607 FOXD4L3Q6VB84 417 aaPredicted RBP30.05■■■□□ 2.4
CPNE1-205ENST00000401607 ILDR1Q86SU0 546 aaPredicted RBP30.05■■■□□ 2.4
CPNE1-205ENST00000401607 MAPKAPK5Q8IW41 473 aa30.05■■■□□ 2.4
CPNE1-205ENST00000401607 FAM184AQ8NB25 1140 aa30.05■■■□□ 2.4
CPNE1-205ENST00000401607 DHX16O60231 1041 aaKnown RBP30.04■■■□□ 2.4
CPNE1-205ENST00000401607 SLC3A2P08195 630 aaKnown RBP30.04■■■□□ 2.4
CPNE1-205ENST00000401607 METAP2P50579 478 aaKnown RBP eCLIP30.04■■■□□ 2.4
CPNE1-205ENST00000401607 WTAPQ15007 396 aa30.04■■■□□ 2.4
CPNE1-205ENST00000401607 SEC23AQ15436 765 aa30.04■■■□□ 2.4
CPNE1-205ENST00000401607 CCDC93Q567U6 631 aa30.04■■■□□ 2.4
CPNE1-205ENST00000401607 ROBO3Q96MS0 1386 aa30.04■■■□□ 2.4
CPNE1-205ENST00000401607 ADAMTSL1Q8N6G6 1762 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 ZBTB43O43298 467 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 FDPSP14324 419 aaKnown RBP30.03■■■□□ 2.4
CPNE1-205ENST00000401607 SLC4A8Q2Y0W8 1093 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 GRIPAP1Q4V328 841 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 STRIP1Q5VSL9 837 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 UBAC1Q9BSL1 405 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 FOCADQ5VW36 1801 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 ERICH2A1L162 156 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 CCDC69A6NI79 296 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 PPFIA3O75145 1194 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 RXRAP19793 462 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 FKBP1AP62942 108 aaKnown RBP30.03■■■□□ 2.4
CPNE1-205ENST00000401607 DACT2Q5SW24 774 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 MICU3Q86XE3 530 aa30.03■■■□□ 2.4
CPNE1-205ENST00000401607 NID2Q14112 1375 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms