RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 GOLIM4O00461 696 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 CYP7A1P22680 504 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 PPP4CP60510 307 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 DYNLL1P63167 89 aaKnown RBP17.63■□□□□ 0.41
COL13A1-204ENST00000398975 MAP3K9P80192 1104 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 TSHZ3Q63HK5 1081 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-204ENST00000398975 ZKSCAN4Q969J2 545 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-204ENST00000398975 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
COL13A1-204ENST00000398975 SNCAIPQ9Y6H5 919 aa17.63■□□□□ 0.41
COL13A1-204ENST00000398975 CHGBP05060 677 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 INPP5BP32019 993 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 SLFNL1Q499Z3 407 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 TEX11Q8IYF3 940 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 RNF186Q9NXI6 227 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 ZNF112Q9UJU3 913 aa17.62■□□□□ 0.41
COL13A1-204ENST00000398975 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
COL13A1-204ENST00000398975 TM4SF4P48230 202 aa17.61■□□□□ 0.41
COL13A1-204ENST00000398975 HDAC1Q13547 482 aaPredicted RBP17.61■□□□□ 0.41
COL13A1-204ENST00000398975 MIGA1Q8NAN2 632 aa17.61■□□□□ 0.41
COL13A1-204ENST00000398975 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
COL13A1-204ENST00000398975 HAUS7Q99871 368 aa17.61■□□□□ 0.41
COL13A1-204ENST00000398975 TCRBV5S4A2TA0A5A2 114 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 PHF20L1A8MW92 1017 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 TRPA1O75762 1119 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-204ENST00000398975 PDE6AP16499 860 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 MAP3K10Q02779 954 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 DCAF15Q66K64 600 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 BEGAINQ9BUH8 593 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 ZNF341Q9BYN7 854 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 OSBPL5Q9H0X9 879 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-204ENST00000398975 PRDM10Q9NQV6 1147 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 PAG1Q9NWQ8 432 aa17.6■□□□□ 0.41
COL13A1-204ENST00000398975 COL2A1P02458 1487 aaPredicted RBP17.6■□□□□ 0.41
COL13A1-204ENST00000398975 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 MYH7P12883 1935 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 IGSF3O75054 1194 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 ZBTB48P10074 688 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-204ENST00000398975 IRX6P78412 446 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-204ENST00000398975 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
COL13A1-204ENST00000398975 TGFBRAP1Q8WUH2 860 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 ECHDC1Q9NTX5 307 aa17.59■□□□□ 0.41
COL13A1-204ENST00000398975 FLT1P17948 1338 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 SPDYE5A6NIY4 337 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 CA12O43570 354 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 IGHDP01880 384 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
COL13A1-204ENST00000398975 SLC9C2Q5TAH2 1124 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 MAPKAPK5Q8IW41 473 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 MS4A4AQ96JQ5 239 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 RIOK1Q9BRS2 568 aaKnown RBP17.58■□□□□ 0.4
COL13A1-204ENST00000398975 R3HDMLQ9H3Y0 253 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 SAGE1Q9NXZ1 904 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 CSADQ9Y600 493 aa17.58■□□□□ 0.4
COL13A1-204ENST00000398975 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
COL13A1-204ENST00000398975 IGF2BP3O00425 579 aaKnown RBP eCLIP17.57■□□□□ 0.4
COL13A1-204ENST00000398975 BAG3O95817 575 aa17.57■□□□□ 0.4
COL13A1-204ENST00000398975 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
COL13A1-204ENST00000398975 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
COL13A1-204ENST00000398975 OTUD5Q96G74 571 aa17.57■□□□□ 0.4
COL13A1-204ENST00000398975 PTPN18Q99952 460 aa17.57■□□□□ 0.4
COL13A1-204ENST00000398975 NOL10Q9BSC4 688 aaKnown RBP17.57■□□□□ 0.4
COL13A1-204ENST00000398975 DDX60LQ5H9U9 1706 aaKnown RBP17.57■□□□□ 0.4
COL13A1-204ENST00000398975 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
COL13A1-204ENST00000398975 PLCG2P16885 1265 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 AAMPQ13685 434 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 PI4K2BQ8TCG2 481 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
COL13A1-204ENST00000398975 MYH1P12882 1939 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 DOCK1Q14185 1865 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 PHIPQ8WWQ0 1821 aa17.56■□□□□ 0.4
COL13A1-204ENST00000398975 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
COL13A1-204ENST00000398975 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 ADD2P35612 726 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 SREBF2Q12772 1141 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
COL13A1-204ENST00000398975 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 ERO1BQ86YB8 467 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 IFNL1Q8IU54 200 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 BRI3BPQ8WY22 251 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 SAP30BPQ9UHR5 308 aaKnown RBP17.55■□□□□ 0.4
COL13A1-204ENST00000398975 PALD1Q9ULE6 856 aa17.55■□□□□ 0.4
COL13A1-204ENST00000398975 IRF6O14896 467 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 TBC1D12O60347 775 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 SMC5Q8IY18 1101 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 LCORLQ8N3X6 602 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 GCC1Q96CN9 775 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 DNAJC18Q9H819 358 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 ATAD5Q96QE3 1844 aa17.54■□□□□ 0.4
COL13A1-204ENST00000398975 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
COL13A1-204ENST00000398975 MAGEB6P1A0A0J9YX57 407 aa17.53■□□□□ 0.4
COL13A1-204ENST00000398975 JAG1P78504 1218 aa17.53■□□□□ 0.4
COL13A1-204ENST00000398975 EVX2Q03828 476 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms