RNA–Protein interactions for RNA: ENST00000398397.3

TMPRSS3-202, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best) BASIC

Gene TMPRSS3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-202ENST00000398397 TCP10Q12799 353 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 NOM1Q5C9Z4 860 aaKnown RBP17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 DCAF15Q66K64 600 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 RAI14Q9P0K7 980 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
TMPRSS3-202ENST00000398397 NOL9Q5SY16 702 aaKnown RBP17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 IFFO2Q5TF58 517 aa17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 NAA16Q6N069 864 aaPredicted RBP17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 WRNIP1Q96S55 665 aa17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 PTPRFP10586 1907 aa17.03■□□□□ 0.32
TMPRSS3-202ENST00000398397 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 OPTNQ96CV9 577 aa17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 ELP3Q9H9T3 547 aa17.02■□□□□ 0.32
TMPRSS3-202ENST00000398397 ATAD5Q96QE3 1844 aa17.02■□□□□ 0.31
TMPRSS3-202ENST00000398397 PHF20L1A8MW92 1017 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 TRPA1O75762 1119 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 INHBEP58166 350 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 TNS4Q8IZW8 715 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 LRRCC1Q9C099 1032 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 OSBPL5Q9H0X9 879 aaPredicted RBP17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 CSADQ9Y600 493 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
TMPRSS3-202ENST00000398397 ATP5JP18859 108 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 INPP5BP32019 993 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 ERO1BQ86YB8 467 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 IFNL1Q8IU54 200 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 NAV1Q8NEY1 1877 aa17■□□□□ 0.31
TMPRSS3-202ENST00000398397 APBB1O00213 710 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 TBC1D12O60347 775 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 PLCG2P16885 1265 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 PPIL2Q13356 520 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 ZKSCAN4Q969J2 545 aaPredicted RBP16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 CRBNQ96SW2 442 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 PTPN18Q99952 460 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 AATFQ9NY61 560 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 FLT1P17948 1338 aa16.99■□□□□ 0.31
TMPRSS3-202ENST00000398397 BAG3O95817 575 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 ALDH1A1P00352 501 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 PICALMQ13492 652 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 TTF1Q15361 905 aaPredicted RBP16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 METTL16Q86W50 562 aaKnown RBP16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 TEX11Q8IYF3 940 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 MYH1P12882 1939 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 LOC285556D6RIA3 1793 aa16.98■□□□□ 0.31
TMPRSS3-202ENST00000398397 TCRBV5S4A2TA0A5A2 114 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 IDH1O75874 414 aaKnown RBP16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 PPATQ06203 517 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 MAP3K12Q12852 859 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 AAMPQ13685 434 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 MAGEB6Q8N7X4 407 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 BRI3BPQ8WY22 251 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 OTUD5Q96G74 571 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 HAUS7Q99871 368 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 RIOK1Q9BRS2 568 aaKnown RBP16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 KCNH4Q9UQ05 1017 aa16.97■□□□□ 0.31
TMPRSS3-202ENST00000398397 IRF6O14896 467 aa16.96■□□□□ 0.31
TMPRSS3-202ENST00000398397 PDE6AP16499 860 aa16.96■□□□□ 0.31
TMPRSS3-202ENST00000398397 CYP7A1P22680 504 aa16.96■□□□□ 0.31
TMPRSS3-202ENST00000398397 GTF2A2P52657 109 aa16.96■□□□□ 0.31
TMPRSS3-202ENST00000398397 R3HDMLQ9H3Y0 253 aa16.96■□□□□ 0.31
TMPRSS3-202ENST00000398397 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.3
TMPRSS3-202ENST00000398397 SLURP2P0DP57 97 aa16.96■□□□□ 0.3
TMPRSS3-202ENST00000398397 DYNLL1P63167 89 aaKnown RBP16.96■□□□□ 0.3
TMPRSS3-202ENST00000398397 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.3
TMPRSS3-202ENST00000398397 ZCCHC17Q9NP64 241 aaKnown RBP16.96■□□□□ 0.3
TMPRSS3-202ENST00000398397 SALL3Q9BXA9 1300 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 CENPFP49454 3210 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 GOLIM4O00461 696 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 HDAC1Q13547 482 aaPredicted RBP16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 MOGSQ13724 837 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 SCYL3Q8IZE3 742 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 EDC3Q96F86 508 aaKnown RBP16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 DHX36Q9H2U1 1008 aaKnown RBP16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 DNAJC18Q9H819 358 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 PAG1Q9NWQ8 432 aa16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 HERC5Q9UII4 1024 aaKnown RBP16.95■□□□□ 0.3
TMPRSS3-202ENST00000398397 CCL15-CCL14A0A0B4J2E2 113 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 GPR25O00155 361 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 CTNND1O60716 968 aaKnown RBP16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 TBC1D8O95759 1140 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 CCL15Q16663 113 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 ZSCAN29Q8IWY8 852 aaPredicted RBP16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 MIGA1Q8NAN2 632 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 ZNF296Q8WUU4 475 aaPredicted RBP16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 DNAJC2Q99543 621 aaKnown RBP16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 ECHDC1Q9NTX5 307 aa16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
TMPRSS3-202ENST00000398397 CETPP11597 493 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms