RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ERICH3Q5RHP9 1530 aa8.21□□□□□ -1.09
SMCO1-201ENST00000397537 MICAL2O94851 1124 aa8.21□□□□□ -1.1
SMCO1-201ENST00000397537 SCP2P22307 547 aa8.21□□□□□ -1.1
SMCO1-201ENST00000397537 EIF6P56537 245 aaKnown RBP8.21□□□□□ -1.1
SMCO1-201ENST00000397537 PPP2R5EQ16537 467 aa8.21□□□□□ -1.1
SMCO1-201ENST00000397537 RSPH1Q8WYR4 309 aa8.21□□□□□ -1.1
SMCO1-201ENST00000397537 CNNM2Q9H8M5 875 aa8.21□□□□□ -1.1
SMCO1-201ENST00000397537 ANO9A1A5B4 782 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 BACH1O14867 736 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 CCNYL3P0C7X3 344 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 TNFAIP3P21580 790 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 RENBPP51606 427 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 GDF10P55107 478 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
SMCO1-201ENST00000397537 FOXK2Q01167 660 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 CHAF1AQ13111 956 aaPredicted RBP8.2□□□□□ -1.1
SMCO1-201ENST00000397537 CCDC85BQ15834 202 aaPredicted RBP8.2□□□□□ -1.1
SMCO1-201ENST00000397537 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 SKAP1Q86WV1 359 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 SLITRK4Q8IW52 837 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 TPH2Q8IWU9 490 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 IFNL2Q8IZJ0 200 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 GPR152Q8TDT2 470 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 PRDM11Q9NQV5 511 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 SERTAD1Q9UHV2 236 aa8.2□□□□□ -1.1
SMCO1-201ENST00000397537 FOXD3Q9UJU5 478 aaPredicted RBP8.2□□□□□ -1.1
SMCO1-201ENST00000397537 MAGEB6P1A0A0J9YX57 407 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 A0A1W2PRQ8 180 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 B2RBV5 119 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 GABRDO14764 452 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 RFPL3O75679 317 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 FAM200BP0CF97 657 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 COBLL1Q53SF7 1204 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 WDR66Q8TBY9 1149 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 NKD1Q969G9 470 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 NUDT12Q9BQG2 462 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.19□□□□□ -1.1
SMCO1-201ENST00000397537 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 LHX6Q9UPM6 363 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 ARAP3Q8WWN8 1544 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 CD109Q6YHK3 1445 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 ORC4O43929 436 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 SNX2O60749 519 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 PTPREP23469 700 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 JAKMIP3Q5VZ66 844 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 CXorf57Q6NSI4 855 aaKnown RBP8.19□□□□□ -1.1
SMCO1-201ENST00000397537 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 SH3RF1Q7Z6J0 888 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 RASSF3Q86WH2 238 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 KIAA1958Q8N8K9 716 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 ST13P5Q8NFI4 369 aaPredicted RBP8.19□□□□□ -1.1
SMCO1-201ENST00000397537 GJA10Q969M2 543 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 OSGEPQ9NPF4 335 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 FAM50BQ9Y247 325 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 TLR6Q9Y2C9 796 aa8.19□□□□□ -1.1
SMCO1-201ENST00000397537 TNKSO95271 1327 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 A6NCN8 305 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 UBAP1LF5GYI3 381 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 SNPHO15079 494 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 AGR2O95994 175 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
SMCO1-201ENST00000397537 RPN1P04843 607 aaKnown RBP8.18□□□□□ -1.1
SMCO1-201ENST00000397537 ZBED6P86452 979 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 STK3Q13188 491 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 CCDC92Q53HC0 331 aaPredicted RBP8.18□□□□□ -1.1
SMCO1-201ENST00000397537 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 SLC9A9Q8IVB4 645 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 PI4K2BQ8TCG2 481 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 FBRSQ9HAH7 460 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 KIAA1468Q9P260 1216 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 TRHDEQ9UKU6 1024 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 DGKBQ9Y6T7 804 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 KDM5BQ9UGL1 1544 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 PTPRTO14522 1441 aa8.18□□□□□ -1.1
SMCO1-201ENST00000397537 PHKG2P15735 406 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 STRN3Q13033 797 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 BIRC3Q13489 604 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 GALEQ14376 348 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 SAFBQ15424 915 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 TBC1D10BQ4KMP7 808 aaPredicted RBP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 DACT2Q5SW24 774 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 MRM1Q6IN84 353 aaKnown RBP8.17□□□□□ -1.1
SMCO1-201ENST00000397537 MZT2AQ6P582 158 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 C1orf228Q6PIY5 440 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 MAATS1Q7Z4T9 603 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PHC3Q8NDX5 983 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PGBD4Q96DM1 585 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 STRN4Q9NRL3 753 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 ZFATQ9P243 1243 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 IP6K2Q9UHH9 426 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 FAM83GA6ND36 823 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 GPR39O43194 453 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PF4P02776 101 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 PCSK2P16519 638 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 GTF2A2P52657 109 aa8.17□□□□□ -1.1
SMCO1-201ENST00000397537 DDX10Q13206 875 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms