RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TDO2P48775 406 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 KCNQ4P56696 695 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 FAM160A1Q05DH4 1040 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 STX1AQ16623 288 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 SWT1Q5T5J6 900 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 MCTP2Q6DN12 878 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 CYB5R4Q7L1T6 521 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 TBC1D10CQ8IV04 446 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 SUGP1Q8IWZ8 645 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 DHX40Q8IX18 779 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 TDRD7Q8NHU6 1098 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 NCOA7Q8NI08 942 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 MRPS27Q92552 414 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 ACSBG1Q96GR2 724 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ALDH8A1Q9H2A2 487 aaPredicted RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 L2HGDHQ9H9P8 463 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 PIH1D3Q9NQM4 214 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 BTG4Q9NY30 223 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ZBTB1Q9Y2K1 713 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ZNF532Q9HCE3 1301 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 JCADQ9P266 1359 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 CCDC69A6NI79 296 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 IRS4O14654 1257 aaPredicted RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 SPTLC2O15270 562 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 PRKAB2O43741 272 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 TUBB4AP04350 444 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ATP1A3P13637 1013 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 CDC27P30260 824 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 SMC1AQ14683 1233 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 CCAR2Q8N163 923 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 PDILTQ8N807 584 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 PRDM16Q9HAZ2 1276 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 MED4Q9NPJ6 270 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 SEC31BQ9NQW1 1179 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 IFNKQ9P0W0 207 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 HPS5Q9UPZ3 1129 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 LAMA4Q16363 1823 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 OVOS2A0A0G2JMS6 1433 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 WDHD1O75717 1129 aaPredicted RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 ATP6V1AP38606 617 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 METAP2P50579 478 aaKnown RBP eCLIP5.76□□□□□ -1.49
SSR1-202ENST00000397511 MYSM1Q5VVJ2 828 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 NAA16Q6N069 864 aaPredicted RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 TMC6Q7Z403 805 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 LINC00301Q8NCQ3 95 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ANKRD20A12PQ8NF67 263 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 TTLL11Q8NHH1 800 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 NUP133Q8WUM0 1156 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 AIDAQ96BJ3 306 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 PSMD1Q99460 953 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 LLPHQ9BRT6 129 aaKnown RBP5.76□□□□□ -1.49
SSR1-202ENST00000397511 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 UBXN6Q9BZV1 441 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 ARMT1Q9H993 441 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 SUFUQ9UMX1 484 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 AKAP2Q9Y2D5 859 aa5.76□□□□□ -1.49
SSR1-202ENST00000397511 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.76□□□□□ -1.495e-9■■□□□ 12.7
SSR1-202ENST00000397511 TRPM3Q9HCF6 1732 aaPredicted RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 RAD21O60216 631 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 ZNF202O95125 648 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 MAP2K2P36507 400 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 GSCP56915 257 aaPredicted RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 PNOCQ13519 176 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 CCDC102BQ68D86 513 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 EGFL6Q8IUX8 553 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 CEP57L1Q8IYX8 460 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 MAGEB6Q8N7X4 407 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 ENGASEQ8NFI3 743 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 APPBP2Q92624 585 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 SLC26A6Q9BXS9 759 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 XPO4Q9C0E2 1151 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 NBPF3Q9H094 633 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 KCND1Q9NSA2 647 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 ABCF2Q9UG63 623 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 KCNJ14Q9UNX9 436 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 TNS3Q68CZ2 1445 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 CAMTA1Q9Y6Y1 1673 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 ANKRD18BA2A2Z9 1011 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 EIF3CLB5ME19 914 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 ERVV-2B6SEH9 535 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 FOXN1O15353 648 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 CAVIN2O95810 425 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 SLC3A2P08195 630 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 PFKFB1P16118 471 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 E2F4Q16254 413 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 MMS22LQ6ZRQ5 1243 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 RBM43Q6ZSC3 357 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 VPS37DQ86XT2 251 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 MB21D2Q8IYB1 491 aaPredicted RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 FMR1NBQ8N0W7 255 aaPredicted RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 CCDC24Q8N4L8 307 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 SLC4A9Q96Q91 983 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 CEP89Q96ST8 783 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 ZCCHC17Q9NP64 241 aaKnown RBP5.75□□□□□ -1.49
SSR1-202ENST00000397511 ANO10Q9NW15 660 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 SLAIN2Q9P270 581 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 JAG2Q9Y219 1238 aa5.75□□□□□ -1.49
SSR1-202ENST00000397511 NEDD4P46934 1319 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms