RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 BCAMP50895 628 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 GPAT2Q6NUI2 795 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
SEC13-205ENST00000397101 SLC45A1Q9Y2W3 748 aa16.94■□□□□ 0.3
SEC13-205ENST00000397101 DLL1O00548 723 aa16.93■□□□□ 0.3
SEC13-205ENST00000397101 IFIT1P09914 478 aaKnown RBP16.93■□□□□ 0.3
SEC13-205ENST00000397101 NBPF7P0C2Y1 421 aaPredicted RBP16.93■□□□□ 0.3
SEC13-205ENST00000397101 IRF5Q13568 498 aa16.93■□□□□ 0.3
SEC13-205ENST00000397101 FASTKD5Q7L8L6 764 aaKnown RBP16.93■□□□□ 0.3
SEC13-205ENST00000397101 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
SEC13-205ENST00000397101 A0A0G2JLL6 359 aaPredicted RBP16.92■□□□□ 0.3
SEC13-205ENST00000397101 RLBP1P12271 317 aa16.92■□□□□ 0.3
SEC13-205ENST00000397101 PUM3Q15397 648 aaKnown RBP16.92■□□□□ 0.3
SEC13-205ENST00000397101 GPR153Q6NV75 609 aa16.92■□□□□ 0.3
SEC13-205ENST00000397101 PRRT2Q7Z6L0 340 aaPredicted RBP16.92■□□□□ 0.3
SEC13-205ENST00000397101 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
SEC13-205ENST00000397101 ZBTB22O15209 634 aa16.91■□□□□ 0.3
SEC13-205ENST00000397101 CDC42EP5Q6NZY7 148 aa16.91■□□□□ 0.3
SEC13-205ENST00000397101 ANKRD44Q8N8A2 993 aa16.91■□□□□ 0.3
SEC13-205ENST00000397101 UNC93B1Q9H1C4 597 aa16.91■□□□□ 0.3
SEC13-205ENST00000397101 PAK6Q9NQU5 681 aaPredicted RBP16.91■□□□□ 0.3
SEC13-205ENST00000397101 DAGLAQ9Y4D2 1042 aa16.91■□□□□ 0.3
SEC13-205ENST00000397101 ADCY3O60266 1144 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 EVI5O60447 810 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
SEC13-205ENST00000397101 CYP2C8P10632 490 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
SEC13-205ENST00000397101 CRISPLD2Q9H0B8 497 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 GABRQQ9UN88 632 aa16.9■□□□□ 0.3
SEC13-205ENST00000397101 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.3
SEC13-205ENST00000397101 PHF20L1A8MW92 1017 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 BMP8BP34820 402 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 FLT3LGP49771 235 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 NFIAQ12857 509 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 EXOC6Q8TAG9 804 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 LPIN2Q92539 896 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
SEC13-205ENST00000397101 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
SEC13-205ENST00000397101 INHAP05111 366 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
SEC13-205ENST00000397101 TCP10Q12799 353 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 SCYL3Q8IZE3 742 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 IDI2Q9BXS1 227 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 AFG3L2Q9Y4W6 797 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 SALL1Q9NSC2 1324 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 MGAMO43451 1857 aa16.88■□□□□ 0.29
SEC13-205ENST00000397101 ENTPD3O75355 529 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 SLC5A1P13866 664 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 PTPRAP18433 802 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 ANKLE1Q8NAG6 615 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 ZHX2Q9Y6X8 837 aa16.87■□□□□ 0.29
SEC13-205ENST00000397101 SOX1O00570 391 aaPredicted RBP16.86■□□□□ 0.29
SEC13-205ENST00000397101 TNPO2O14787 897 aaKnown RBP16.86■□□□□ 0.29
SEC13-205ENST00000397101 TFRCP02786 760 aaKnown RBP16.86■□□□□ 0.29
SEC13-205ENST00000397101 DEFB118Q96PH6 123 aa16.86■□□□□ 0.29
SEC13-205ENST00000397101 GDF15Q99988 308 aa16.86■□□□□ 0.29
SEC13-205ENST00000397101 USP40Q9NVE5 1235 aa16.86■□□□□ 0.29
SEC13-205ENST00000397101 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
SEC13-205ENST00000397101 EYA2O00167 538 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 SEMA3EO15041 775 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 LDHBP07195 334 aaKnown RBP16.85■□□□□ 0.29
SEC13-205ENST00000397101 PRDX5P30044 214 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 DIXDC1Q155Q3 683 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 NECAB2Q7Z6G3 386 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 STAP2Q9UGK3 403 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 UNC80Q8N2C7 3258 aa16.85■□□□□ 0.29
SEC13-205ENST00000397101 CTNND1O60716 968 aaKnown RBP16.84■□□□□ 0.29
SEC13-205ENST00000397101 ELNP15502 786 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 RFX5P48382 616 aaPredicted RBP16.84■□□□□ 0.29
SEC13-205ENST00000397101 FAM110CQ1W6H9 321 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 SMCR8Q8TEV9 937 aaPredicted RBP16.84■□□□□ 0.29
SEC13-205ENST00000397101 COA7Q96BR5 231 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 LRCH3Q96II8 777 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 GNL3LQ9NVN8 582 aaKnown RBP16.84■□□□□ 0.29
SEC13-205ENST00000397101 GTF3C3Q9Y5Q9 886 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
SEC13-205ENST00000397101 GAKO14976 1311 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 GNAI3P08754 354 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 ZFPM1Q8IX07 1006 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 ZGPATQ8N5A5 531 aaKnown RBP16.83■□□□□ 0.28
SEC13-205ENST00000397101 PAWRQ96IZ0 340 aaKnown RBP16.83■□□□□ 0.28
SEC13-205ENST00000397101 PNMA3Q9UL41 463 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 AGTPBP1Q9UPW5 1226 aa16.83■□□□□ 0.28
SEC13-205ENST00000397101 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
SEC13-205ENST00000397101 RGS3P49796 1198 aa16.82■□□□□ 0.28
SEC13-205ENST00000397101 LRIT3Q3SXY7 679 aa16.82■□□□□ 0.28
SEC13-205ENST00000397101 GADL1Q6ZQY3 521 aa16.82■□□□□ 0.28
SEC13-205ENST00000397101 FAM163AQ96GL9 167 aaPredicted RBP16.82■□□□□ 0.28
SEC13-205ENST00000397101 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEC13-205ENST00000397101 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
SEC13-205ENST00000397101 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms