RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 ZNF165P49910 485 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 CACNB3P54284 484 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 KRT40Q6A162 431 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 KIF1AQ12756 1690 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 XDHP47989 1333 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
MCF2L-205ENST00000397017 GRAPQ13588 217 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 TMTC2Q8N394 836 aa17.56■□□□□ 0.4
MCF2L-205ENST00000397017 NSUN7Q8NE18 718 aaKnown RBP17.56■□□□□ 0.4
MCF2L-205ENST00000397017 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-205ENST00000397017 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-205ENST00000397017 PFKFB2O60825 505 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 BTDP43251 543 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 PRR5LQ6MZQ0 368 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 CNNM3Q8NE01 707 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 PLIN2Q99541 437 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 KIF5BP33176 963 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
MCF2L-205ENST00000397017 ANO6Q4KMQ2 910 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 CYB5R4Q7L1T6 521 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 DIS3L2Q8IYB7 885 aaKnown RBP17.55■□□□□ 0.4
MCF2L-205ENST00000397017 GPCPD1Q9NPB8 672 aa17.55■□□□□ 0.4
MCF2L-205ENST00000397017 HLA-DOAP06340 250 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 AFMP43652 599 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 FAM43AQ8N2R8 423 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 SLC44A5Q8NCS7 719 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 NAT10Q9H0A0 1025 aaKnown RBP17.54■□□□□ 0.4
MCF2L-205ENST00000397017 NMT2O60551 498 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 APOA5Q6Q788 366 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 ESPNB1AK53 854 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-205ENST00000397017 NEDD4P46934 1319 aa17.54■□□□□ 0.4
MCF2L-205ENST00000397017 ZYXQ15942 572 aaKnown RBP17.53■□□□□ 0.4
MCF2L-205ENST00000397017 OGFOD1Q8N543 542 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 PPIP5K2O43314 1243 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 SERPINC1P01008 464 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 CHRNA5P30532 468 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 LARGE2Q8N3Y3 721 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 PCMTD1Q96MG8 357 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-205ENST00000397017 ZNF174Q15697 407 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 LUZP1Q86V48 1076 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 SENP2Q9HC62 589 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 BTBD18B2RXH4 712 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
MCF2L-205ENST00000397017 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
MCF2L-205ENST00000397017 USP40Q9NVE5 1235 aa17.53■□□□□ 0.4
MCF2L-205ENST00000397017 ADCY5O95622 1261 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 MCM7P33993 719 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 SYKP43405 635 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 GPSM2P81274 684 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 LRRC4BQ9NT99 713 aa17.52■□□□□ 0.4
MCF2L-205ENST00000397017 MRPS27Q92552 414 aaKnown RBP17.52■□□□□ 0.39
MCF2L-205ENST00000397017 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-205ENST00000397017 CDK5RAP3Q96JB5 506 aa17.52■□□□□ 0.39
MCF2L-205ENST00000397017 CPVLQ9H3G5 476 aa17.52■□□□□ 0.39
MCF2L-205ENST00000397017 GSG1L2A8MUP6 293 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 TXLNAP40222 546 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 EYA3Q99504 573 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 GJA3Q9Y6H8 435 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 ATP2B4P23634 1241 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 R3HCC1Q9Y3T6 440 aaKnown RBP17.51■□□□□ 0.39
MCF2L-205ENST00000397017 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 FANCBQ8NB91 859 aa17.51■□□□□ 0.39
MCF2L-205ENST00000397017 NR1I2O75469 434 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 BAG6P46379 1132 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 NAPAP54920 295 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 SLC51AQ86UW1 340 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 C21orf2O43822 256 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 ALDH1B1P30837 517 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 PDE6BP35913 854 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 NOC3LQ8WTT2 800 aaKnown RBP17.5■□□□□ 0.39
MCF2L-205ENST00000397017 STAMQ92783 540 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 FEZ1Q99689 392 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 LLPHQ9BRT6 129 aaKnown RBP17.5■□□□□ 0.39
MCF2L-205ENST00000397017 USP17L3A6NCW0 530 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 USP17L4A6NCW7 530 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 RAD17O75943 681 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 SF3B3Q15393 1217 aaKnown RBP17.5■□□□□ 0.39
MCF2L-205ENST00000397017 USP17L1Q7RTZ2 530 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 FNBP4Q8N3X1 1017 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-205ENST00000397017 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-205ENST00000397017 LEMD3Q9Y2U8 911 aa17.5■□□□□ 0.39
MCF2L-205ENST00000397017 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 TYRO3Q06418 890 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 LRRC47Q8N1G4 583 aaKnown RBP17.49■□□□□ 0.39
MCF2L-205ENST00000397017 SH3RF3Q8TEJ3 882 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-205ENST00000397017 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 GPKOWQ92917 476 aaPredicted RBP eCLIP17.49■□□□□ 0.39
MCF2L-205ENST00000397017 CD209Q9NNX6 404 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 MED23Q9ULK4 1368 aa17.49■□□□□ 0.39
MCF2L-205ENST00000397017 DHX58Q96C10 678 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms