RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 C20orf194Q5TEA3 1177 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 TXNDC2Q86VQ3 553 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 EFCC1Q9HA90 598 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 CHMP2AO43633 222 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 LRRC23Q53EV4 343 aaPredicted RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 JADE1Q6IE81 842 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 KRT12Q99456 494 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 STX2P32856 288 aa11.48□□□□□ -0.57
COL4A4-201ENST00000396625 PROSER2Q86WR7 435 aaPredicted RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.48□□□□□ -0.57
COL4A4-201ENST00000396625 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 SPATS2Q86XZ4 545 aaKnown RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 TTLL3Q9Y4R7 772 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 C6orf229H3BNL8 230 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 B4DLN1 442 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 MAN1A1P33908 653 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 MRPL12P52815 198 aaKnown RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 THUMPD2Q9BTF0 503 aaKnown RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 SYCE1Q8N0S2 351 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 RNF40O75150 1001 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 TRAF1Q13077 416 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 ASIC2Q16515 512 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 ZSCAN26Q16670 478 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 KRT71Q3SY84 523 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 SKAP1Q86WV1 359 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 CCDC105Q8IYK2 499 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 MAP3K2Q9Y2U5 619 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 F6X3S4 739 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 CLTAP09496 248 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 TAF7Q15545 349 aaPredicted RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 CFAP70Q5T0N1 1121 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 NBPF6Q5VWK0 638 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 NBPF4Q96M43 638 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 NOC2LQ9Y3T9 749 aaKnown RBP11.47□□□□□ -0.57
COL4A4-201ENST00000396625 ITSN2Q9NZM3 1697 aa11.47□□□□□ -0.57
COL4A4-201ENST00000396625 GNAQP50148 359 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 P3H4Q92791 437 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.57
COL4A4-201ENST00000396625 CFAP221Q4G0U5 840 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 MUM1L1Q5H9M0 696 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 KRT79Q5XKE5 535 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 TRIM27P14373 513 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 BRAPQ7Z569 592 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 FAM71BQ8TC56 605 aa11.46□□□□□ -0.57
COL4A4-201ENST00000396625 EPRSP07814 1512 aaKnown RBP11.46□□□□□ -0.57
COL4A4-201ENST00000396625 BRF1Q92994 677 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 SMTNP53814 917 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 SECISBP2LQ93073 1101 aaKnown RBP11.46□□□□□ -0.58
COL4A4-201ENST00000396625 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 PHBP35232 272 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 ARHGAP4P98171 946 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 BIRC2Q13490 618 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 LDHCP07864 332 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 BRD2P25440 801 aaKnown RBP11.46□□□□□ -0.58
COL4A4-201ENST00000396625 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.58
COL4A4-201ENST00000396625 VPS37BQ9H9H4 285 aa11.46□□□□□ -0.58
COL4A4-201ENST00000396625 GSTA1P08263 222 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 GSTA2P09210 222 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 CNNM4Q6P4Q7 775 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 RAB17Q9H0T7 212 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 MAN1A2O60476 641 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 ZGPATQ8N5A5 531 aaKnown RBP11.45□□□□□ -0.58
COL4A4-201ENST00000396625 MRFAP1L1Q96HT8 127 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
COL4A4-201ENST00000396625 HNRNPCL2B2RXH8 293 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 HNRNPCL1O60812 293 aaKnown RBP11.45□□□□□ -0.58
COL4A4-201ENST00000396625 DTHD1Q6ZMT9 781 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.45□□□□□ -0.58
COL4A4-201ENST00000396625 SNRKQ9NRH2 765 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 TRAF5O00463 557 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 UBE3BQ7Z3V4 1068 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 CCDC13Q8IYE1 715 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 LRGUKQ96M69 825 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 TNNI2P48788 182 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 POMGNT1Q8WZA1 660 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 FNBP1Q96RU3 617 aa11.45□□□□□ -0.58
COL4A4-201ENST00000396625 CALUO43852 315 aaPredicted RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 TSKSQ9UJT2 592 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 IQUBQ8NA54 791 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 NSMCE1Q8WV22 266 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 NAP1L4Q99733 375 aaKnown RBP11.44□□□□□ -0.58
COL4A4-201ENST00000396625 TMTC4Q5T4D3 741 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 MYRIPQ8NFW9 859 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 NACA2Q9H009 215 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 PARP2Q9UGN5 583 aa11.44□□□□□ -0.58
COL4A4-201ENST00000396625 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms