RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 AKNAD1Q5T1N1 836 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 FUCA2Q9BTY2 467 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 KIAA1468Q9P260 1216 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 SAP30BPQ9UHR5 308 aaKnown RBP16.59■□□□□ 0.25
SREBF1-205ENST00000395757 DYNC1I1O14576 645 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 CDC25AP30304 524 aa16.59■□□□□ 0.25
SREBF1-205ENST00000395757 NMT2O60551 498 aa16.58■□□□□ 0.25
SREBF1-205ENST00000395757 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.25
SREBF1-205ENST00000395757 ADALQ6DHV7 355 aa16.58■□□□□ 0.25
SREBF1-205ENST00000395757 IQCA1Q86XH1 822 aa16.58■□□□□ 0.25
SREBF1-205ENST00000395757 ZNF652Q9Y2D9 606 aa16.58■□□□□ 0.25
SREBF1-205ENST00000395757 WDHD1O75717 1129 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-205ENST00000395757 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 MCM9Q9NXL9 1143 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 G3V3G9 751 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 XBP1P17861 261 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 U2AF2P26368 475 aaKnown RBP eCLIP16.58■□□□□ 0.24
SREBF1-205ENST00000395757 NLRP5P59047 1200 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 DCAF8Q5TAQ9 597 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 MKNK2Q9HBH9 465 aa16.58■□□□□ 0.24
SREBF1-205ENST00000395757 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 KCNH3Q9ULD8 1083 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 HPS5Q9UPZ3 1129 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 ERCC3P19447 782 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
SREBF1-205ENST00000395757 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
SREBF1-205ENST00000395757 SYT10Q6XYQ8 523 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-205ENST00000395757 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 SETDB2Q96T68 719 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
SREBF1-205ENST00000395757 VWA3AA6NCI4 1184 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 URI1O94763 535 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 MCM7P33993 719 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 MYRIPQ8NFW9 859 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 ESR2Q92731 530 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 PCMTD1Q96MG8 357 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 EPB41L4AQ9HCS5 686 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 GRIN1Q05586 938 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 ITPK1Q13572 414 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 ZNF654Q8IZM8 581 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 CTCFLQ8NI51 663 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
SREBF1-205ENST00000395757 KRT23Q9C075 422 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 SERTAD1Q9UHV2 236 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 TNKSO95271 1327 aa16.56■□□□□ 0.24
SREBF1-205ENST00000395757 BRAPQ7Z569 592 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 CYP2D6P10635 497 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 EVX2Q03828 476 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 PPARAQ07869 468 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 LONRF3Q496Y0 759 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 NLRP3Q96P20 1036 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 CPVLQ9H3G5 476 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 DNAI1Q9UI46 699 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
SREBF1-205ENST00000395757 OVOS2A0A0G2JMS6 1433 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 MARCH6O60337 910 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-205ENST00000395757 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
SREBF1-205ENST00000395757 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 PCDHB6Q9Y5E3 794 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 PCDHA5Q9Y5H7 936 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
SREBF1-205ENST00000395757 KLRK1P26718 216 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 FANCCQ00597 558 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 MNS1Q8NEH6 495 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 FANCLQ9NW38 375 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 ZMYM6O95789 1325 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 CSF1RP07333 972 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 EIF6P56537 245 aaKnown RBP16.54■□□□□ 0.24
SREBF1-205ENST00000395757 USP49Q70CQ1 688 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 BLZF1Q9H2G9 400 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 SNW1Q13573 536 aaKnown RBP16.54■□□□□ 0.24
SREBF1-205ENST00000395757 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
SREBF1-205ENST00000395757 UBE3CQ15386 1083 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
SREBF1-205ENST00000395757 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-205ENST00000395757 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 LRRC8AQ8IWT6 810 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 FMR1NBQ8N0W7 255 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-205ENST00000395757 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
SREBF1-205ENST00000395757 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
SREBF1-205ENST00000395757 MED1Q15648 1581 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-205ENST00000395757 C6orf229H3BNL8 230 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 FOXP2O15409 715 aa16.52■□□□□ 0.24
SREBF1-205ENST00000395757 PLEKHA8P1O95397 391 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms