RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 KLRG1Q96E93 195 aa24.08■■□□□ 1.44
SNCA-203ENST00000394986 SLURP2P0DP57 97 aa24.07■■□□□ 1.44
SNCA-203ENST00000394986 ARMC9Q7Z3E5 817 aa24.07■■□□□ 1.44
SNCA-203ENST00000394986 LCORLQ8N3X6 602 aa24.07■■□□□ 1.44
SNCA-203ENST00000394986 FSD1Q9BTV5 496 aa24.07■■□□□ 1.44
SNCA-203ENST00000394986 OSBPL5Q9H0X9 879 aaPredicted RBP24.07■■□□□ 1.44
SNCA-203ENST00000394986 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.07■■□□□ 1.44
SNCA-203ENST00000394986 FLT1P17948 1338 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 PPP1R12BO60237 982 aaPredicted RBP24.06■■□□□ 1.44
SNCA-203ENST00000394986 USP2O75604 605 aaPredicted RBP24.06■■□□□ 1.44
SNCA-203ENST00000394986 MBD4O95243 580 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 UBE3CQ15386 1083 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 ZSCAN25Q6NSZ9 544 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 MIGA2Q7L4E1 593 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 CCDC136Q96JN2 1154 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 CSRNP1Q96S65 589 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 OSBPL3Q9H4L5 887 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 ARMT1Q9H993 441 aa24.06■■□□□ 1.44
SNCA-203ENST00000394986 RGMBQ6NW40 437 aa24.05■■□□□ 1.44
SNCA-203ENST00000394986 CENPQQ7L2Z9 268 aaPredicted RBP24.05■■□□□ 1.44
SNCA-203ENST00000394986 CAPNS2Q96L46 248 aa24.05■■□□□ 1.44
SNCA-203ENST00000394986 PUS7LQ9H0K6 701 aaKnown RBP24.05■■□□□ 1.44
SNCA-203ENST00000394986 RNF113AO15541 343 aaKnown RBP24.04■■□□□ 1.44
SNCA-203ENST00000394986 NPM3O75607 178 aaKnown RBP24.04■■□□□ 1.44
SNCA-203ENST00000394986 SKAP1Q86WV1 359 aa24.04■■□□□ 1.44
SNCA-203ENST00000394986 HHIPL1Q96JK4 782 aa24.04■■□□□ 1.44
SNCA-203ENST00000394986 ATRNL1Q5VV63 1379 aa24.04■■□□□ 1.44
SNCA-203ENST00000394986 USP5P45974 858 aa24.03■■□□□ 1.44
SNCA-203ENST00000394986 ZNF157P51786 506 aaPredicted RBP24.03■■□□□ 1.44
SNCA-203ENST00000394986 MAP3K11Q16584 847 aa24.03■■□□□ 1.44
SNCA-203ENST00000394986 SLC4A8Q2Y0W8 1093 aa24.03■■□□□ 1.44
SNCA-203ENST00000394986 LDLRAD1Q5T700 205 aa24.03■■□□□ 1.44
SNCA-203ENST00000394986 CLMNQ96JQ2 1002 aa24.03■■□□□ 1.44
SNCA-203ENST00000394986 SAP30BPQ9UHR5 308 aaKnown RBP24.03■■□□□ 1.44
SNCA-203ENST00000394986 WDR33Q9C0J8 1336 aaKnown RBP24.03■■□□□ 1.44
SNCA-203ENST00000394986 TRIM6-TRIM34B2RNG4 842 aa24.02■■□□□ 1.44
SNCA-203ENST00000394986 IREB2P48200 963 aaKnown RBP24.02■■□□□ 1.44
SNCA-203ENST00000394986 CERS3Q8IU89 383 aa24.02■■□□□ 1.44
SNCA-203ENST00000394986 OSBP2Q969R2 916 aa24.02■■□□□ 1.44
SNCA-203ENST00000394986 EVI5LQ96CN4 794 aa24.02■■□□□ 1.44
SNCA-203ENST00000394986 FAM196BA6NMK8 535 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 PRKAB2O43741 272 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 AOC2O75106 756 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 SDR42E1Q8WUS8 393 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 APPBP2Q92624 585 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 HOOK2Q96ED9 719 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 CRNKL1Q9BZJ0 848 aaKnown RBP24.01■■□□□ 1.43
SNCA-203ENST00000394986 COL2A1P02458 1487 aaPredicted RBP24.01■■□□□ 1.43
SNCA-203ENST00000394986 ZFYP08048 801 aaPredicted RBP24.01■■□□□ 1.43
SNCA-203ENST00000394986 DCAF15Q66K64 600 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 RASAL3Q86YV0 1011 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.01■■□□□ 1.43
SNCA-203ENST00000394986 AIDAQ96BJ3 306 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 WRNIP1Q96S55 665 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 SEC62Q99442 399 aaKnown RBP24.01■■□□□ 1.43
SNCA-203ENST00000394986 PALD1Q9ULE6 856 aa24.01■■□□□ 1.43
SNCA-203ENST00000394986 MYH7P12883 1935 aa24■■□□□ 1.43
SNCA-203ENST00000394986 FAM155AB1AL88 458 aaPredicted RBP24■■□□□ 1.43
SNCA-203ENST00000394986 M0R2C6 588 aa24■■□□□ 1.43
SNCA-203ENST00000394986 ZIC5Q96T25 663 aa24■■□□□ 1.43
SNCA-203ENST00000394986 ZNF341Q9BYN7 854 aa24■■□□□ 1.43
SNCA-203ENST00000394986 CDK5RAP2Q96SN8 1893 aa23.99■■□□□ 1.43
SNCA-203ENST00000394986 SLC10A3P09131 477 aa23.99■■□□□ 1.43
SNCA-203ENST00000394986 ECE1P42892 770 aa23.99■■□□□ 1.43
SNCA-203ENST00000394986 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.99■■□□□ 1.43
SNCA-203ENST00000394986 GSPT1P15170 499 aaKnown RBP23.98■■□□□ 1.43
SNCA-203ENST00000394986 INPP5BP32019 993 aa23.98■■□□□ 1.43
SNCA-203ENST00000394986 MKRN3Q13064 507 aaKnown RBP23.98■■□□□ 1.43
SNCA-203ENST00000394986 VGLL4Q14135 290 aa23.98■■□□□ 1.43
SNCA-203ENST00000394986 LRRFIP1Q32MZ4 808 aaKnown RBP23.98■■□□□ 1.43
SNCA-203ENST00000394986 ANKRD13AQ8IZ07 590 aa23.98■■□□□ 1.43
SNCA-203ENST00000394986 ZKSCAN4Q969J2 545 aaPredicted RBP23.98■■□□□ 1.43
SNCA-203ENST00000394986 ELP3Q9H9T3 547 aa23.98■■□□□ 1.43
SNCA-203ENST00000394986 FOCADQ5VW36 1801 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 OTOFQ9HC10 1997 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 MAP3K9P80192 1104 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 ZMYM1Q5SVZ6 1142 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 TTC22Q5TAA0 569 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 SLC4A4Q9Y6R1 1079 aa23.97■■□□□ 1.43
SNCA-203ENST00000394986 GPAA1O43292 621 aa23.96■■□□□ 1.43
SNCA-203ENST00000394986 EVX2Q03828 476 aa23.96■■□□□ 1.43
SNCA-203ENST00000394986 SLC10A4Q96EP9 437 aa23.96■■□□□ 1.43
SNCA-203ENST00000394986 STRBPQ96SI9 672 aaKnown RBP23.96■■□□□ 1.43
SNCA-203ENST00000394986 DHX36Q9H2U1 1008 aaKnown RBP23.96■■□□□ 1.43
SNCA-203ENST00000394986 DCP1AQ9NPI6 582 aaPredicted RBP23.96■■□□□ 1.43
SNCA-203ENST00000394986 AK9Q5TCS8 1911 aa23.95■■□□□ 1.43
SNCA-203ENST00000394986 JMYQ8N9B5 988 aa23.95■■□□□ 1.42
SNCA-203ENST00000394986 CNKSR2Q8WXI2 1034 aa23.95■■□□□ 1.42
SNCA-203ENST00000394986 CCDC102AQ96A19 550 aa23.95■■□□□ 1.42
SNCA-203ENST00000394986 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.95■■□□□ 1.42
SNCA-203ENST00000394986 PI4KBQ9UBF8 816 aa23.95■■□□□ 1.42
SNCA-203ENST00000394986 ZNF112Q9UJU3 913 aa23.95■■□□□ 1.42
SNCA-203ENST00000394986 PHF20L1A8MW92 1017 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 MAP3K10Q02779 954 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 CCDC129Q6ZRS4 1044 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 FAM227BQ96M60 508 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 DNAJC18Q9H819 358 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 MCM9Q9NXL9 1143 aa23.94■■□□□ 1.42
SNCA-203ENST00000394986 PPP4R2Q9NY27 417 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms