RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 LIFRP42702 1097 aa17.59■□□□□ 0.41
GPC3-202ENST00000394299 MPNDQ8N594 471 aa17.59■□□□□ 0.41
GPC3-202ENST00000394299 ALG1Q9BT22 464 aa17.59■□□□□ 0.41
GPC3-202ENST00000394299 GOLPH3LQ9H4A5 285 aa17.59■□□□□ 0.41
GPC3-202ENST00000394299 ESPNB1AK53 854 aa17.58■□□□□ 0.41
GPC3-202ENST00000394299 CHMP4CQ96CF2 233 aa17.58■□□□□ 0.41
GPC3-202ENST00000394299 USP17L12C9JPN9 530 aa17.58■□□□□ 0.4
GPC3-202ENST00000394299 USP17L21D6R901 530 aa17.58■□□□□ 0.4
GPC3-202ENST00000394299 GUCY1A2P33402 732 aa17.58■□□□□ 0.4
GPC3-202ENST00000394299 CTR9Q6PD62 1173 aa17.58■□□□□ 0.4
GPC3-202ENST00000394299 TNMDQ9H2S6 317 aa17.58■□□□□ 0.4
GPC3-202ENST00000394299 WTAPQ15007 396 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 CCAR1Q8IX12 1150 aaKnown RBP17.57■□□□□ 0.4
GPC3-202ENST00000394299 SLC26A6Q9BXS9 759 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 USP25Q9UHP3 1055 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 CYP2D6P10635 497 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 IARSP41252 1262 aaKnown RBP17.57■□□□□ 0.4
GPC3-202ENST00000394299 ME1P48163 572 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 GPSM2P81274 684 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 KIF23Q02241 960 aaPredicted RBP17.57■□□□□ 0.4
GPC3-202ENST00000394299 DDR1Q08345 913 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 NUP133Q8WUM0 1156 aa17.57■□□□□ 0.4
GPC3-202ENST00000394299 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
GPC3-202ENST00000394299 SEMA3EO15041 775 aa17.56■□□□□ 0.4
GPC3-202ENST00000394299 KRT40Q6A162 431 aa17.56■□□□□ 0.4
GPC3-202ENST00000394299 RPGRQ92834 1020 aaKnown RBP17.56■□□□□ 0.4
GPC3-202ENST00000394299 PCDHA7Q9UN72 937 aa17.56■□□□□ 0.4
GPC3-202ENST00000394299 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
GPC3-202ENST00000394299 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
GPC3-202ENST00000394299 ADRA2BP18089 450 aa17.55■□□□□ 0.4
GPC3-202ENST00000394299 MYSM1Q5VVJ2 828 aa17.55■□□□□ 0.4
GPC3-202ENST00000394299 CLSTN2Q9H4D0 955 aa17.55■□□□□ 0.4
GPC3-202ENST00000394299 BAZ2AQ9UIF9 1905 aaKnown RBP17.55■□□□□ 0.4
GPC3-202ENST00000394299 A0A087WWV3 80 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 AP5Z1O43299 807 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 PLCB2Q00722 1185 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 ERCC4Q92889 916 aaPredicted RBP17.54■□□□□ 0.4
GPC3-202ENST00000394299 RNF41Q9H4P4 317 aaPredicted RBP17.54■□□□□ 0.4
GPC3-202ENST00000394299 DCP1AQ9NPI6 582 aaPredicted RBP17.54■□□□□ 0.4
GPC3-202ENST00000394299 ANAPC4Q9UJX5 808 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 TNKSO95271 1327 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 NMT2O60551 498 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 SYNE3Q6ZMZ3 975 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 UBAC1Q9BSL1 405 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 BRIP1Q9BX63 1249 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 RTEL1Q9NZ71 1219 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
GPC3-202ENST00000394299 ERICH2A1L162 156 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 CCDC192P0DO97 292 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 TYRO3Q06418 890 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 SNW1Q13573 536 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 SART3Q15020 963 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 SEC23AQ15436 765 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 MYH13Q9UKX3 1938 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 A0A1B0GVL5 298 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 CDKL5O76039 1030 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 SSRP1Q08945 709 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 RTN1Q16799 776 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 DZIP1Q86YF9 867 aaKnown RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
GPC3-202ENST00000394299 ESR2Q92731 530 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
GPC3-202ENST00000394299 hCG_1642624A0A1W2PR95 340 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 UFL1O94874 794 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 USP17L8P0C7I0 530 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 XDHP47989 1333 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 CHD4Q14839 1912 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 STK38Q15208 465 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 FSIP1Q8NA03 581 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 TDRD7Q8NHU6 1098 aaKnown RBP17.52■□□□□ 0.4
GPC3-202ENST00000394299 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.52■□□□□ 0.4
GPC3-202ENST00000394299 KCNJ14Q9UNX9 436 aa17.52■□□□□ 0.4
GPC3-202ENST00000394299 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.39
GPC3-202ENST00000394299 ST5P78524 1137 aa17.52■□□□□ 0.39
GPC3-202ENST00000394299 CRY2Q49AN0 593 aa17.52■□□□□ 0.39
GPC3-202ENST00000394299 FANCBQ8NB91 859 aa17.52■□□□□ 0.39
GPC3-202ENST00000394299 TIAM2Q8IVF5 1701 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 MARCKSP29966 332 aaPredicted RBP17.51■□□□□ 0.39
GPC3-202ENST00000394299 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
GPC3-202ENST00000394299 ZNF827Q17R98 1081 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 LUZP1Q86V48 1076 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 ENGASEQ8NFI3 743 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 ZSCAN10Q96SZ4 725 aaPredicted RBP17.51■□□□□ 0.39
GPC3-202ENST00000394299 UBR3Q6ZT12 1888 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 FMNL1O95466 1100 aaPredicted RBP17.51■□□□□ 0.39
GPC3-202ENST00000394299 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
GPC3-202ENST00000394299 IFNAR1P17181 557 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 ANO6Q4KMQ2 910 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 NBPF11Q86T75 865 aa17.51■□□□□ 0.39
GPC3-202ENST00000394299 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms