RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TMEM67Q5HYA8 995 aa21.74■■□□□ 1.07
CBX1-202ENST00000393408 STK36Q9NRP7 1315 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 LRP5O75197 1615 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 NUP98P52948 1817 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 DOCK2Q92608 1830 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 LIFRP42702 1097 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 METTL16Q86W50 562 aaKnown RBP21.73■■□□□ 1.07
CBX1-202ENST00000393408 AIDAQ96BJ3 306 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 MYL10Q9BUA6 226 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 INCENPQ9NQS7 918 aa21.73■■□□□ 1.07
CBX1-202ENST00000393408 DPF2Q92785 391 aa21.72■■□□□ 1.07
CBX1-202ENST00000393408 EPB41L4AQ9HCS5 686 aaPredicted RBP21.72■■□□□ 1.07
CBX1-202ENST00000393408 TAOK2Q9UL54 1235 aa21.72■■□□□ 1.07
CBX1-202ENST00000393408 MORC2Q9Y6X9 1032 aaPredicted RBP21.72■■□□□ 1.07
CBX1-202ENST00000393408 EVA1CP58658 441 aa21.72■■□□□ 1.07
CBX1-202ENST00000393408 TIAM2Q8IVF5 1701 aa21.72■■□□□ 1.07
CBX1-202ENST00000393408 UBE2Q2LH0YL09 131 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 CBFA2T2O43439 604 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 PDE8AO60658 829 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 ELF2Q15723 593 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 LONRF3Q496Y0 759 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 KRBA2Q6ZNG9 492 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 TRMT112Q9UI30 125 aaKnown RBP21.71■■□□□ 1.07
CBX1-202ENST00000393408 PATL2C9JE40 543 aaKnown RBP21.71■■□□□ 1.07
CBX1-202ENST00000393408 TUBB4AP04350 444 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 FGFR2P21802 821 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 UBASH3AP57075 661 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 PUM3Q15397 648 aaKnown RBP21.71■■□□□ 1.07
CBX1-202ENST00000393408 SYT10Q6XYQ8 523 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 IFNL3Q8IZI9 196 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 ZSWIM5Q9P217 1185 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 KCNH3Q9ULD8 1083 aa21.71■■□□□ 1.07
CBX1-202ENST00000393408 FMNL1O95466 1100 aaPredicted RBP21.7■■□□□ 1.06
CBX1-202ENST00000393408 SSRP1Q08945 709 aaKnown RBP21.7■■□□□ 1.06
CBX1-202ENST00000393408 CCDC93Q567U6 631 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 FOXP4Q8IVH2 680 aaPredicted RBP21.7■■□□□ 1.06
CBX1-202ENST00000393408 LPIN2Q92539 896 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 SLC26A6Q9BXS9 759 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 SLC12A7Q9Y666 1083 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 TACC3Q9Y6A5 838 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 NID2Q14112 1375 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 MYO1BO43795 1136 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 SERPINC1P01008 464 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 CYP19A1P11511 503 aaPredicted RBP21.7■■□□□ 1.06
CBX1-202ENST00000393408 CTDSPL2Q05D32 466 aa21.7■■□□□ 1.06
CBX1-202ENST00000393408 IFIT3O14879 490 aaKnown RBP21.69■■□□□ 1.06
CBX1-202ENST00000393408 FBXO38Q6PIJ6 1188 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 OLFM4Q6UX06 510 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 CNNM3Q8NE01 707 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 NAPBQ9H115 298 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 TMX1Q9H3N1 280 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 MBD4O95243 580 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 IFNAR1P17181 557 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 NOSTRINQ8IVI9 506 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 VSTM4Q8IW00 320 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 ELOA2Q8IYF1 753 aaPredicted RBP21.69■■□□□ 1.06
CBX1-202ENST00000393408 KRI1Q8N9T8 703 aaKnown RBP21.69■■□□□ 1.06
CBX1-202ENST00000393408 SPATA5Q8NB90 893 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 SLC4A9Q96Q91 983 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 ZHX1Q9UKY1 873 aaPredicted RBP21.69■■□□□ 1.06
CBX1-202ENST00000393408 PCDHA5Q9Y5H7 936 aa21.69■■□□□ 1.06
CBX1-202ENST00000393408 MROH5Q6ZUA9 1318 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 HELBQ8NG08 1087 aaPredicted RBP21.68■■□□□ 1.06
CBX1-202ENST00000393408 SYTL4Q96C24 671 aaPredicted RBP21.68■■□□□ 1.06
CBX1-202ENST00000393408 CCP110O43303 1012 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 MDM2Q00987 491 aaPredicted RBP21.68■■□□□ 1.06
CBX1-202ENST00000393408 CFAP100Q494V2 611 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 STK11IPQ8N1F8 1099 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 MAGEB6Q8N7X4 407 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 WASF1Q92558 559 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 CNNM2Q9H8M5 875 aa21.68■■□□□ 1.06
CBX1-202ENST00000393408 BMP6P22004 513 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 AKNAD1Q5T1N1 836 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 FANCLQ9NW38 375 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 ZBTB1Q9Y2K1 713 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 MMP1P03956 469 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 TOB1P50616 345 aaPredicted RBP21.67■■□□□ 1.06
CBX1-202ENST00000393408 MAP3K12Q12852 859 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 KRT23Q9C075 422 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 ARMT1Q9H993 441 aa21.67■■□□□ 1.06
CBX1-202ENST00000393408 GSG1L2A8MUP6 293 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 BTBD18B2RXH4 712 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 GUCY1A2P33402 732 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 ETF1P62495 437 aaKnown RBP21.66■■□□□ 1.06
CBX1-202ENST00000393408 PDE4BQ07343 736 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 RASGRF1Q13972 1273 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 TMEM232C9JQI7 657 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 FOXN1O15353 648 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 FAM53CQ9NYF3 392 aa21.66■■□□□ 1.06
CBX1-202ENST00000393408 BCORQ6W2J9 1755 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 SLC5A1P13866 664 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 LRRN4CLQ8ND94 238 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 INTS13Q9NVM9 706 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.65■■□□□ 1.061e-8■□□□□ 8.9
CBX1-202ENST00000393408 BCL9O00512 1426 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 PHLPP2Q6ZVD8 1323 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 ERVV-1B6SEH8 477 aa21.65■■□□□ 1.06
CBX1-202ENST00000393408 GABPB1Q06547 395 aaPredicted RBP21.65■■□□□ 1.06
CBX1-202ENST00000393408 SAFBQ15424 915 aaKnown RBP eCLIP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms