RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 SSRP1Q08945 709 aaKnown RBP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 NCAPHQ15003 741 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 INTS3Q68E01 1043 aaKnown RBP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 GDF6Q6KF10 455 aaPredicted RBP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 MPRIPQ6WCQ1 1025 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 EEPD1Q7L9B9 569 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 GPBAR1Q8TDU6 330 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 ACSBG1Q96GR2 724 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 ANTXR1Q9H6X2 564 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 KRT82Q9NSB4 513 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 ZMYM5Q9UJ78 669 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 NAGPAQ9UK23 515 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 TACC3Q9Y6A5 838 aa4.28□□□□□ -1.72
RNU6-140P-201ENST00000384566 CDC14CA4D256 554 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 GPR25O00155 361 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 GFRA3O60609 400 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 DIAPH1O60610 1272 aaKnown RBP4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 ASMTLO95671 621 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 EPHA1P21709 976 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 ADH6P28332 368 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 PDE4BQ07343 736 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 LONRF2Q1L5Z9 754 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 ZC3H12BQ5HYM0 836 aaKnown RBP4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 PSAPL1Q6NUJ1 521 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 SPATC1Q76KD6 591 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 SV2AQ7L0J3 742 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 HDXQ7Z353 690 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 RPUSD2Q8IZ73 545 aaKnown RBP4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 ZSWIM2Q8NEG5 633 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 WNT8BQ93098 351 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 CHMP4AQ9BY43 222 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 KLHL42Q9P2K6 505 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 PTCH2Q9Y6C5 1203 aa4.27□□□□□ -1.73
RNU6-140P-201ENST00000384566 CCDC163A0A0D9SF12 145 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 SLC22A31A6NKX4 558 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 B2RBV5 119 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 ST8SIA5O15466 376 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 RGS9O75916 674 aaPredicted RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 VIL1P09327 827 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 ARAFP10398 606 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 NME1P15531 152 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 SELPP16109 830 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PLCG1P19174 1290 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 MX2P20592 715 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 CDK8P49336 464 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PIP4K2BP78356 416 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 C19orf57Q0VDD7 668 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 INPP5AQ14642 412 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 POU4F3Q15319 338 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 TKFCQ3LXA3 575 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 WIPI1Q5MNZ9 446 aaPredicted RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 TMEM201Q5SNT2 666 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 CDCP2Q5VXM1 449 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 HGSNATQ68CP4 663 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 MRM1Q6IN84 353 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 FAM117BQ6P1L5 589 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 LRFN4Q6PJG9 635 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 VHLLQ6RSH7 139 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 UNC5AQ6ZN44 842 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 KRT26Q7Z3Y9 468 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 VWA5B2Q8N398 1253 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 SLC7A3Q8WY07 619 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 NANOS1Q8WY41 292 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 ATG4CQ96DT6 458 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PLPPR2Q96GM1 343 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 TRIM47Q96LD4 638 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 MDFIQ99750 246 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 CORO1BQ9BR76 489 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 ZC3H12CQ9C0D7 883 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 EPN3Q9H201 632 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PHAXQ9H814 394 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 CNNM2Q9H8M5 875 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 OSGEPQ9NPF4 335 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 TYW1Q9NV66 732 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 DDX56Q9NY93 547 aaKnown RBP4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 GMIPQ9P107 970 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 REV1Q9UBZ9 1251 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 DACH1Q9UI36 760 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 KLF15Q9UIH9 416 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PLAAQ9Y263 795 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 PPME1Q9Y570 386 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 CORINQ9Y5Q5 1042 aa4.26□□□□□ -1.73
RNU6-140P-201ENST00000384566 ELOA3CA0A087WX78 387 aaPredicted RBP4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 IQCA1LA6NCM1 817 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 ELOA3DA6NLF2 546 aaPredicted RBP4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 UPK3BL1B0FP48 263 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 UPK3BL2E5RIL1 263 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 TNFRSF10CO14798 259 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 PPFIA3O75145 1194 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 HCLS1P14317 486 aaPredicted RBP4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 ALAS2P22557 587 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 PLEKHG6Q3KR16 790 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 ELOA3BQ3SY89 546 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 DALRD3Q5D0E6 543 aaKnown RBP4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 TMEM67Q5HYA8 995 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 CCDC181Q5TID7 509 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 OVOS1Q6IE37 1185 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 NLRC3Q7RTR2 1065 aa4.25□□□□□ -1.73
RNU6-140P-201ENST00000384566 LRRC47Q8N1G4 583 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms