RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 BAG1Q99933 345 aaPredicted RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 LRP6O75581 1613 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 CYP19A1P11511 503 aaPredicted RBP15.88■□□□□ 0.13
SDC1-202ENST00000381150 TOGARAM2Q6ZUX3 1019 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 CEP126Q9P2H0 1117 aa15.88■□□□□ 0.13
SDC1-202ENST00000381150 MAST3O60307 1309 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 DHX16O60231 1041 aaKnown RBP15.87■□□□□ 0.13
SDC1-202ENST00000381150 CTDNEP1O95476 244 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 TPM1P09493 284 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 ADORA1P30542 326 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 EXOSC10Q01780 885 aaKnown RBP15.87■□□□□ 0.13
SDC1-202ENST00000381150 KIF4BQ2VIQ3 1234 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 GOLGA1Q92805 767 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 AGXT2Q9BYV1 514 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 FOXP2O15409 715 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 RNF113AO15541 343 aaKnown RBP15.87■□□□□ 0.13
SDC1-202ENST00000381150 STARD3NLO95772 234 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 SYKP43405 635 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 NOM1Q5C9Z4 860 aaKnown RBP15.87■□□□□ 0.13
SDC1-202ENST00000381150 FAN1Q9Y2M0 1017 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 ANKRD36CQ5JPF3 1778 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 PLCH1Q4KWH8 1693 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
SDC1-202ENST00000381150 KLHL10Q6JEL2 608 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 TRIM65Q6PJ69 517 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
SDC1-202ENST00000381150 XAGE2Q96GT9 111 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
SDC1-202ENST00000381150 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
SDC1-202ENST00000381150 NWD2Q9ULI1 1742 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 PFKFB1P16118 471 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 NLRP12P59046 1061 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 ADALQ6DHV7 355 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 KIF6Q6ZMV9 814 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 NLRP10Q86W26 655 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 ZNF330Q9Y3S2 320 aaPredicted RBP15.86■□□□□ 0.13
SDC1-202ENST00000381150 RIPOR2Q9Y4F9 1068 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 NUP98P52948 1817 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 MTF1Q14872 753 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
SDC1-202ENST00000381150 OSBP2Q969R2 916 aa15.86■□□□□ 0.13
SDC1-202ENST00000381150 PHLPP2Q6ZVD8 1323 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 AKAP11Q9UKA4 1901 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 M0R2C6 588 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 WDHD1O75717 1129 aaPredicted RBP15.85■□□□□ 0.13
SDC1-202ENST00000381150 SCARF1Q14162 830 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 WASHC4Q2M389 1173 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 SRLQ86TD4 932 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 TTLL11Q8NHH1 800 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 CLIC6Q96NY7 704 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 IBSPP21815 317 aaPredicted RBP15.85■□□□□ 0.13
SDC1-202ENST00000381150 ACTN2P35609 894 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 NAA16Q6N069 864 aaPredicted RBP15.85■□□□□ 0.13
SDC1-202ENST00000381150 FBXO18Q8NFZ0 1043 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 MYH3P11055 1940 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 GOLGA8BA8MQT2 603 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 CHMP4BP1P59074 171 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 MYL5Q02045 173 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
SDC1-202ENST00000381150 CCDC85AQ96PX6 553 aaPredicted RBP15.85■□□□□ 0.13
SDC1-202ENST00000381150 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
SDC1-202ENST00000381150 COL22A1Q8NFW1 1626 aaPredicted RBP15.84■□□□□ 0.13
SDC1-202ENST00000381150 LOC102724159A0A0B4J2E5 919 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 PWP2Q15269 919 aaKnown RBP15.84■□□□□ 0.13
SDC1-202ENST00000381150 LONRF3Q496Y0 759 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 REXO1L1PQ8IX06 675 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 KLHL34Q8N239 644 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 LINC00301Q8NCQ3 95 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 SMARCC2Q8TAQ2 1214 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 WNK3Q9BYP7 1800 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 PFKFB2O60825 505 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 HMGB1P09429 215 aaKnown RBP15.84■□□□□ 0.13
SDC1-202ENST00000381150 AKAP17AQ02040 695 aaKnown RBP15.84■□□□□ 0.13
SDC1-202ENST00000381150 TAF7LQ5H9L4 462 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 AIFM3Q96NN9 605 aa15.84■□□□□ 0.13
SDC1-202ENST00000381150 E7EWF7 191 aa15.83■□□□□ 0.13
SDC1-202ENST00000381150 SLC20A2Q08357 652 aa15.83■□□□□ 0.13
SDC1-202ENST00000381150 IFIT5Q13325 482 aaKnown RBP15.83■□□□□ 0.13
SDC1-202ENST00000381150 ILDR1Q86SU0 546 aaPredicted RBP15.83■□□□□ 0.13
SDC1-202ENST00000381150 CNNM3Q8NE01 707 aa15.83■□□□□ 0.13
SDC1-202ENST00000381150 FUT8Q9BYC5 575 aa15.83■□□□□ 0.13
SDC1-202ENST00000381150 ZBTB1Q9Y2K1 713 aa15.83■□□□□ 0.13
SDC1-202ENST00000381150 KLF18A0A0U1RQI7 1052 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 FKBP4Q02790 459 aaKnown RBP eCLIP15.83■□□□□ 0.123e-7■■■□□ 19.2
SDC1-202ENST00000381150 ZNF569Q5MCW4 686 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 CCDC82Q8N4S0 544 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 KCNG4Q8TDN1 519 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 VGLL2Q8N8G2 317 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 GREM2Q9H772 168 aa15.83■□□□□ 0.12
SDC1-202ENST00000381150 SLIT2O94813 1529 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 A0A0U1RQJ8 604 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 GPTP24298 496 aa15.82■□□□□ 0.12
SDC1-202ENST00000381150 PDIA3P30101 505 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 334.5 ms