RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 C10orf71Q711Q0 1435 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 CDK5RAP2Q96SN8 1893 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 LDHCP07864 332 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 DOK7Q18PE1 504 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 SKOR2Q2VWA4 1001 aaPredicted RBP20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 TMEM67Q5HYA8 995 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 SGMS1Q86VZ5 419 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 C7orf43Q8WVR3 580 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 CNKSR1Q969H4 720 aa20.39■□□□□ 0.85
THUMPD2-201ENST00000378727 IFIT3O14879 490 aaKnown RBP20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 FGRP09769 529 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 LIFRP42702 1097 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 APOA5Q6Q788 366 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 DLEC1Q9Y238 1755 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 BAG3O95817 575 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 HMGN5P82970 282 aaKnown RBP20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 SBK1Q52WX2 424 aa20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 ZNF219Q9P2Y4 722 aaPredicted RBP20.38■□□□□ 0.85
THUMPD2-201ENST00000378727 GPR75-ASB3A0A0A6YYF3 556 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 PPFIA3O75145 1194 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 CYP2D6P10635 497 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 SNED1Q8TER0 1413 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 CHMP4CQ96CF2 233 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 EYA3Q99504 573 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 ZKSCAN3Q9BRR0 538 aa20.37■□□□□ 0.85
THUMPD2-201ENST00000378727 FDPSP14324 419 aaKnown RBP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 DEKP35659 375 aaKnown RBP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 CERS5Q8N5B7 392 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 FAM163AQ96GL9 167 aaPredicted RBP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 MTA3Q9BTC8 594 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 GZF1Q9H116 711 aaPredicted RBP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 ARPP21Q9UBL0 812 aaPredicted RBP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 GAKO14976 1311 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 USP17L8P0C7I0 530 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 BTDP43251 543 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 FAM184AQ8NB25 1140 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 ESR2Q92731 530 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 ATP6V1DQ9Y5K8 247 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 NAV1Q8NEY1 1877 aa20.36■□□□□ 0.85
THUMPD2-201ENST00000378727 PCP11498 1178 aaKnown RBP20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 KLHL40Q2TBA0 621 aa20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 NOL10Q9BSC4 688 aaKnown RBP20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 GDPD2Q9HCC8 539 aa20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 MCM9Q9NXL9 1143 aa20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 DDX49Q9Y6V7 483 aaKnown RBP20.35■□□□□ 0.85
THUMPD2-201ENST00000378727 DHX16O60231 1041 aaKnown RBP20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 PRDM1O75626 825 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 RXRAP19793 462 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 USP5P45974 858 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 NFXL1Q6ZNB6 911 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 FBXW7Q969H0 707 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 CCDC125Q86Z20 511 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 TGFBRAP1Q8WUH2 860 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 MYL10Q9BUA6 226 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
THUMPD2-201ENST00000378727 ZBTB43O43298 467 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 CDC27P30260 824 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 RHBDL3P58872 404 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 WTAPQ15007 396 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 MICU3Q86XE3 530 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 GPT2Q8TD30 523 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 DBNDD1Q9H9R9 158 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 SUGT1Q9Y2Z0 365 aa20.33■□□□□ 0.85
THUMPD2-201ENST00000378727 SCN9AQ15858 1988 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 ZNF646O15015 1829 aaPredicted RBP20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 ORC4O43929 436 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 ADD1P35611 737 aaKnown RBP20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 DNM1Q05193 864 aaKnown RBP20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 SEC23AQ15436 765 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 C12orf60Q5U649 245 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 CERS3Q8IU89 383 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 SLF2Q8IX21 1173 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 TMEM87AQ8NBN3 555 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 KCNQ5Q9NR82 932 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 FAM217BQ9NTX9 383 aaPredicted RBP20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 SLC12A7Q9Y666 1083 aa20.33■□□□□ 0.84
THUMPD2-201ENST00000378727 DDX60LQ5H9U9 1706 aaKnown RBP20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 CCDC69A6NI79 296 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 RANBP6O60518 1105 aaKnown RBP20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 SLC4A8Q2Y0W8 1093 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 PODNQ7Z5L7 613 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 UBAC1Q9BSL1 405 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 KIF3AQ9Y496 699 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 DAGLAQ9Y4D2 1042 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 KIF13BQ9NQT8 1826 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 TNKSO95271 1327 aa20.32■□□□□ 0.84
THUMPD2-201ENST00000378727 G3V3G9 751 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 CPLX1O14810 134 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 DCAF8Q5TAQ9 597 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 FAM173BQ6P4H8 233 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 CCDC144CPQ8IYA2 1237 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 NID2Q14112 1375 aa20.31■□□□□ 0.84
THUMPD2-201ENST00000378727 FOCADQ5VW36 1801 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms