RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 LRRC37A3O60309 1634 aa9.4□□□□□ -0.91
CKAP2-203ENST00000378037 BTBD18B2RXH4 712 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 SORBS3O60504 671 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 RAD17O75943 681 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 ZNF165P49910 485 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 ISCA1Q9BUE6 129 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 ATRNO75882 1429 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
CKAP2-203ENST00000378037 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 ZSWIM5Q9P217 1185 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 NHSQ6T4R5 1651 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 SERPINC1P01008 464 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 TFAP4Q01664 338 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 SP4Q02446 784 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 TOB2Q14106 344 aaPredicted RBP9.39□□□□□ -0.91
CKAP2-203ENST00000378037 WDR78Q5VTH9 848 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
CKAP2-203ENST00000378037 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 ZSWIM6Q9HCJ5 1215 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 POLD4Q9HCU8 107 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 PARP3Q9Y6F1 533 aa9.39□□□□□ -0.91
CKAP2-203ENST00000378037 BRWD3Q6RI45 1802 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 BRD1O95696 1058 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 SLC3A2P08195 630 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CASP1P29466 404 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 EIF5P55010 431 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 ZNF396Q96N95 335 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CRNKL1Q9BZJ0 848 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 TTF2Q9UNY4 1162 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 DPP8Q6V1X1 898 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 ESR2Q92731 530 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 DHX58Q96C10 678 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CFAP45Q9UL16 551 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CPDO75976 1380 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 PDIA3P30101 505 aaKnown RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 NKX1-1Q15270 411 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CYB5R4Q7L1T6 521 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 BMP2KQ9NSY1 1161 aaPredicted RBP9.38□□□□□ -0.91
CKAP2-203ENST00000378037 COL15A1P39059 1388 aa9.38□□□□□ -0.91
CKAP2-203ENST00000378037 CCDC183Q5T5S1 534 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 C16orf45Q96MC5 204 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 VIRMAQ69YN4 1812 aaKnown RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 ZNF609O15014 1411 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 NEDD4P46934 1319 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 C21orf2O43822 256 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 CAMTA2O94983 1202 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 ZFYP08048 801 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 IDEP14735 1019 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 DNA2P51530 1060 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 UBE2HP62256 183 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 CCDC84Q86UT8 332 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 CLIC4Q9Y696 253 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 TNKSO95271 1327 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 KIF24Q5T7B8 1368 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 JCADQ9P266 1359 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 LY75O60449 1722 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 VWA3AA6NCI4 1184 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 XBP1P17861 261 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 PTMSP20962 102 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 SLC16A2P36021 539 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 MTX1Q13505 466 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 CFAP100Q494V2 611 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 JAKMIP3Q5VZ66 844 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 PIK3AP1Q6ZUJ8 805 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 DIS3L2Q8IYB7 885 aaKnown RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
CKAP2-203ENST00000378037 CNNM3Q8NE01 707 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 BCS1LQ9Y276 419 aa9.37□□□□□ -0.91
CKAP2-203ENST00000378037 MECOMQ03112 1051 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 PPARAQ07869 468 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 TBC1D10BQ4KMP7 808 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 AOPEPQ8N6M6 819 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 LEO1Q8WVC0 666 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 SCAND2PQ9GZW5 306 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 HELLSQ9NRZ9 838 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 CTDP1Q9Y5B0 961 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 V9GYY5 206 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 DISP2A7MBM2 1401 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 TCP10L2B9ZVM9 353 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
CKAP2-203ENST00000378037 ADD2P35612 726 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 TXNRD1Q16881 649 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 USH1GQ495M9 461 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 KRT40Q6A162 431 aa9.36□□□□□ -0.91
CKAP2-203ENST00000378037 MIGA2Q7L4E1 593 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms