RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 HSP90AA5PQ58FG0 334 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 DCAF17Q5H9S7 520 aaPredicted RBP11.83□□□□□ -0.52
RTN3-206ENST00000377819 ACBD5Q5T8D3 534 aaPredicted RBP11.83□□□□□ -0.52
RTN3-206ENST00000377819 PRPF38AQ8NAV1 312 aaKnown RBP11.83□□□□□ -0.52
RTN3-206ENST00000377819 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.52
RTN3-206ENST00000377819 RNF40O75150 1001 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 GPC4O75487 556 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 CYP7A1P22680 504 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 STRN3Q13033 797 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 CCDC152Q4G0S7 254 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
RTN3-206ENST00000377819 TRIM55Q9BYV6 548 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 RASSF4Q9H2L5 321 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 EXOC7Q9UPT5 735 aa11.83□□□□□ -0.52
RTN3-206ENST00000377819 TTC4O95801 387 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 UBXN1Q04323 297 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 ANGPTL3Q9Y5C1 460 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 TRAF5O00463 557 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 POTEDQ86YR6 584 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 CARD10Q9BWT7 1032 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 TSGA10Q9BZW7 698 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 F8W031 263 aaPredicted RBP11.82□□□□□ -0.52
RTN3-206ENST00000377819 TROVE2P10155 538 aaKnown RBP eCLIP11.82□□□□□ -0.52
RTN3-206ENST00000377819 DNM2P50570 870 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 PALM2Q8IXS6 379 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 MRPL46Q9H2W6 279 aaKnown RBP11.82□□□□□ -0.52
RTN3-206ENST00000377819 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
RTN3-206ENST00000377819 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 NBPF14Q5TI25 921 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 PPP4R4Q6NUP7 873 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 CTAGE3PQ8IX95 158 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 IQUBQ8NA54 791 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 SKA2Q8WVK7 121 aaPredicted RBP11.82□□□□□ -0.52
RTN3-206ENST00000377819 PGBD1Q96JS3 809 aa11.82□□□□□ -0.52
RTN3-206ENST00000377819 ADGBQ8N7X0 1667 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 PTPRGP23470 1445 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 CCDC169A6NNP5 214 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 CHMP2AO43633 222 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
RTN3-206ENST00000377819 INPP5BP32019 993 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 UTP11Q9Y3A2 253 aaKnown RBP11.81□□□□□ -0.52
RTN3-206ENST00000377819 IFNA8P32881 189 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 ANKRD35Q8N283 1001 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 P3H4Q92791 437 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 BRF1Q92994 677 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 DHX58Q96C10 678 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 KCNG1Q9UIX4 513 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 ARHGAP42A6NI28 874 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 APOEP02649 317 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 RHOXF2BP0C7M4 288 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 DTHD1Q6ZMT9 781 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 SPDL1Q96EA4 605 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 FGD4Q96M96 766 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 RHOXF2Q9BQY4 288 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 SLC13A4Q9UKG4 626 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 AMOTL2Q9Y2J4 779 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 HGSO14964 777 aaPredicted RBP11.81□□□□□ -0.52
RTN3-206ENST00000377819 ARHGAP25P42331 645 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 PDZD4Q76G19 769 aaPredicted RBP11.81□□□□□ -0.52
RTN3-206ENST00000377819 HDXQ7Z353 690 aa11.81□□□□□ -0.52
RTN3-206ENST00000377819 NOP9Q86U38 636 aaKnown RBP11.81□□□□□ -0.52
RTN3-206ENST00000377819 HCLS1P14317 486 aaPredicted RBP11.8□□□□□ -0.52
RTN3-206ENST00000377819 SLC9C1Q4G0N8 1177 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 BSPRYQ5W0U4 402 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 PAWRQ96IZ0 340 aaKnown RBP11.8□□□□□ -0.52
RTN3-206ENST00000377819 ABCC10Q5T3U5 1492 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 BCORL1Q5H9F3 1711 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 MICAL1Q8TDZ2 1067 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 MAIP1Q8WWC4 291 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 POMGNT1Q8WZA1 660 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 RPGRIP1Q96KN7 1286 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 SLC12A5Q9H2X9 1139 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 LMCD1Q9NZU5 365 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 TRPC6Q9Y210 931 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
RTN3-206ENST00000377819 C8orf74Q6P047 294 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 TEKT2Q9UIF3 430 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 SCAPERQ9BY12 1400 aa11.8□□□□□ -0.52
RTN3-206ENST00000377819 NR1H4Q96RI1 486 aaPredicted RBP11.79□□□□□ -0.52
RTN3-206ENST00000377819 IRAK4Q9NWZ3 460 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 EYA3Q99504 573 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 AZI2Q9H6S1 392 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 AKNAQ7Z591 1439 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 PPP1R12AO14974 1030 aaPredicted RBP11.79□□□□□ -0.52
RTN3-206ENST00000377819 HIP1RO75146 1068 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 BLVRAP53004 296 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 TRIM60Q495X7 471 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 RNF217Q8TC41 542 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 HDAC11Q96DB2 347 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 CCDC138Q96M89 665 aa11.79□□□□□ -0.52
RTN3-206ENST00000377819 RBSNQ9H1K0 784 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms