RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RHBDL3P58872 404 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 TSHZ3Q63HK5 1081 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 CLEC17AQ6ZS10 378 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 ERC1Q8IUD2 1116 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 RAI14Q9P0K7 980 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 LDLRAD1Q5T700 205 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 SPRYD3Q8NCJ5 442 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
VRK3-202ENST00000377011 ZNF512BQ96KM6 892 aaPredicted RBP14.86□□□□□ -0.03
VRK3-202ENST00000377011 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
VRK3-202ENST00000377011 WDHD1O75717 1129 aaPredicted RBP14.85□□□□□ -0.03
VRK3-202ENST00000377011 GJA5P36382 358 aa14.85□□□□□ -0.03
VRK3-202ENST00000377011 KIF23Q02241 960 aaPredicted RBP14.85□□□□□ -0.03
VRK3-202ENST00000377011 MIGA2Q7L4E1 593 aa14.85□□□□□ -0.03
VRK3-202ENST00000377011 OTUD7AQ8TE49 926 aaPredicted RBP14.85□□□□□ -0.03
VRK3-202ENST00000377011 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
VRK3-202ENST00000377011 CDK5RAP2Q96SN8 1893 aa14.85□□□□□ -0.03
VRK3-202ENST00000377011 GPR75-ASB3A0A0A6YYF3 556 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 ECE1P42892 770 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 HSP90AB4PQ58FF6 505 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
VRK3-202ENST00000377011 ZGPATQ8N5A5 531 aaKnown RBP14.84□□□□□ -0.03
VRK3-202ENST00000377011 FAM163AQ96GL9 167 aaPredicted RBP14.84□□□□□ -0.03
VRK3-202ENST00000377011 LRP2BPQ9P2M1 347 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 MAST2Q6P0Q8 1798 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 AK9Q5TCS8 1911 aa14.84□□□□□ -0.03
VRK3-202ENST00000377011 MRE11P49959 708 aa14.83□□□□□ -0.03
VRK3-202ENST00000377011 FKBP1BP68106 108 aa14.83□□□□□ -0.03
VRK3-202ENST00000377011 COL13A1Q5TAT6 717 aaPredicted RBP14.83□□□□□ -0.03
VRK3-202ENST00000377011 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.03
VRK3-202ENST00000377011 TNPO1Q92973 898 aaKnown RBP14.83□□□□□ -0.03
VRK3-202ENST00000377011 CSRNP1Q96S65 589 aa14.83□□□□□ -0.03
VRK3-202ENST00000377011 DDTLA6NHG4 134 aaPredicted RBP14.83□□□□□ -0.04
VRK3-202ENST00000377011 DYNLL1P63167 89 aaKnown RBP14.83□□□□□ -0.04
VRK3-202ENST00000377011 PICALMQ13492 652 aa14.83□□□□□ -0.04
VRK3-202ENST00000377011 MAP3K11Q16584 847 aa14.83□□□□□ -0.04
VRK3-202ENST00000377011 SH3RF3Q8TEJ3 882 aaPredicted RBP14.83□□□□□ -0.04
VRK3-202ENST00000377011 LRRCC1Q9C099 1032 aa14.83□□□□□ -0.04
VRK3-202ENST00000377011 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
VRK3-202ENST00000377011 REC8O95072 547 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 HSP90AA1P07900 732 aaKnown RBP14.82□□□□□ -0.04
VRK3-202ENST00000377011 IFIT2P09913 472 aaKnown RBP14.82□□□□□ -0.04
VRK3-202ENST00000377011 NF2P35240 595 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 TNFAIP1Q13829 316 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 SPTY2D1Q68D10 685 aaPredicted RBP14.82□□□□□ -0.04
VRK3-202ENST00000377011 FAM83AQ86UY5 434 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 FAM151AQ8WW52 585 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 AATFQ9NY61 560 aaKnown RBP eCLIP14.82□□□□□ -0.04
VRK3-202ENST00000377011 ATRNL1Q5VV63 1379 aa14.82□□□□□ -0.04
VRK3-202ENST00000377011 IDH1O75874 414 aaKnown RBP14.81□□□□□ -0.04
VRK3-202ENST00000377011 MAP2K2P36507 400 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 SUPT20HL1Q3ZLR7 823 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 FKBP1CQ5VVH2 108 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 ARMC9Q7Z3E5 817 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 ZKSCAN4Q969J2 545 aaPredicted RBP14.81□□□□□ -0.04
VRK3-202ENST00000377011 DNAJC2Q99543 621 aaKnown RBP14.81□□□□□ -0.04
VRK3-202ENST00000377011 USP26Q9BXU7 913 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 SIPA1L1O43166 1804 aa14.81□□□□□ -0.04
VRK3-202ENST00000377011 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 GOLIM4O00461 696 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 HSPA8P11142 646 aaKnown RBP14.8□□□□□ -0.04
VRK3-202ENST00000377011 LBX1P52954 281 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 NOGQ13253 232 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 NAA16Q6N069 864 aaPredicted RBP14.8□□□□□ -0.04
VRK3-202ENST00000377011 MIGA1Q8NAN2 632 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRK3-202ENST00000377011 CCDC102AQ96A19 550 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 IDI2Q9BXS1 227 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 ELP3Q9H9T3 547 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 TMOD2Q9NZR1 351 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.8□□□□□ -0.04
VRK3-202ENST00000377011 GOLGA6L22H0YM25 854 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 XRCC6P12956 609 aaKnown RBP eCLIP14.8□□□□□ -0.04
VRK3-202ENST00000377011 INPP5BP32019 993 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 TNNI2P48788 182 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 VGLL4Q14135 290 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 SPRYD7Q5W111 196 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 MAGEB6Q8N7X4 407 aa14.8□□□□□ -0.04
VRK3-202ENST00000377011 PPP1R12BO60237 982 aaPredicted RBP14.79□□□□□ -0.04
VRK3-202ENST00000377011 SDSP20132 328 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 CYP7A1P22680 504 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 NUCB2P80303 420 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 EVX2Q03828 476 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 CWC22Q9HCG8 908 aaKnown RBP14.79□□□□□ -0.04
VRK3-202ENST00000377011 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 CASP8AP2Q9UKL3 1982 aa14.79□□□□□ -0.04
VRK3-202ENST00000377011 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 RPAP1Q9BWH6 1393 aaPredicted RBP14.78□□□□□ -0.04
VRK3-202ENST00000377011 CD2BP2O95400 341 aaKnown RBP14.78□□□□□ -0.04
VRK3-202ENST00000377011 MAP2K1Q02750 393 aaPredicted RBP14.78□□□□□ -0.04
VRK3-202ENST00000377011 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
VRK3-202ENST00000377011 SLC4A8Q2Y0W8 1093 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 R3HDMLQ9H3Y0 253 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 ST18O60284 1047 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 MAP4K4O95819 1239 aaPredicted RBP14.78□□□□□ -0.04
VRK3-202ENST00000377011 ATP5JP18859 108 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms