RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 NLRP10Q86W26 655 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 KRT222Q8N1A0 295 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 EPB41L4AQ9HCS5 686 aaPredicted RBP15.24■□□□□ 0.03
ACTN1-202ENST00000376839 STRN4Q9NRL3 753 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 PCDHA5Q9Y5H7 936 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
ACTN1-202ENST00000376839 GIGYF2Q6Y7W6 1299 aaKnown RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 STRBPQ96SI9 672 aaKnown RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 FAM53CQ9NYF3 392 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 DNAI1Q9UI46 699 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 KCNH3Q9ULD8 1083 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.23■□□□□ 0.034e-9■■□□□ 14.3
ACTN1-202ENST00000376839 MAP3K15Q6ZN16 1313 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 CUTAO60888 179 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 GUCY1A2P33402 732 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 ETF1P62495 437 aaKnown RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 GRIN1Q05586 938 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 GABPB1Q06547 395 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 VSTM4Q8IW00 320 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 CNNM3Q8NE01 707 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 TMEM87BQ96K49 555 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
ACTN1-202ENST00000376839 TMX1Q9H3N1 280 aa15.23■□□□□ 0.03
ACTN1-202ENST00000376839 SLFN14P0C7P3 912 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 TRIM29Q14134 588 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 TRIM65Q6PJ69 517 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 HELBQ8NG08 1087 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-202ENST00000376839 UTP14AQ9BVJ6 771 aaKnown RBP15.22■□□□□ 0.03
ACTN1-202ENST00000376839 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.22■□□□□ 0.03
ACTN1-202ENST00000376839 ST7Q9NRC1 585 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 PDE8BO95263 885 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 H2AFXP16104 143 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-202ENST00000376839 ZNF771Q7L3S4 317 aaPredicted RBP15.22■□□□□ 0.03
ACTN1-202ENST00000376839 SGMS1Q86VZ5 419 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 ZSWIM5Q9P217 1185 aa15.22■□□□□ 0.03
ACTN1-202ENST00000376839 CBFA2T2O43439 604 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.03
ACTN1-202ENST00000376839 OLFM4Q6UX06 510 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 PIGBQ92521 554 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 BTBD18B2RXH4 712 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 SNAP23O00161 211 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-202ENST00000376839 TOP1P11387 765 aaKnown RBP15.21■□□□□ 0.03
ACTN1-202ENST00000376839 TOB1P50616 345 aaPredicted RBP15.21■□□□□ 0.03
ACTN1-202ENST00000376839 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 REXO1L1PQ8IX06 675 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 TBC1D2BQ9UPU7 963 aa15.21■□□□□ 0.03
ACTN1-202ENST00000376839 IFIT3O14879 490 aaKnown RBP15.21■□□□□ 0.02
ACTN1-202ENST00000376839 ARID4AP29374 1257 aaPredicted RBP15.21■□□□□ 0.02
ACTN1-202ENST00000376839 TMEM139Q8IV31 216 aa15.21■□□□□ 0.02
ACTN1-202ENST00000376839 NOSTRINQ8IVI9 506 aa15.21■□□□□ 0.02
ACTN1-202ENST00000376839 SLC12A7Q9Y666 1083 aa15.21■□□□□ 0.02
ACTN1-202ENST00000376839 MBD4O95243 580 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 MDM2Q00987 491 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-202ENST00000376839 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
ACTN1-202ENST00000376839 IFNL3Q8IZI9 196 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
ACTN1-202ENST00000376839 PHLPP2Q6ZVD8 1323 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 FMNL1O95466 1100 aaPredicted RBP15.2■□□□□ 0.02
ACTN1-202ENST00000376839 CLCN6P51797 869 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 ARHGAP29Q52LW3 1261 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 ARMT1Q9H993 441 aa15.2■□□□□ 0.02
ACTN1-202ENST00000376839 LIFRP42702 1097 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 FMR1Q06787 632 aaKnown RBP eCLIP15.19■□□□□ 0.023e-6■■■□□ 16.8
ACTN1-202ENST00000376839 ZNF827Q17R98 1081 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 CMTR1Q8N1G2 835 aaKnown RBP15.19■□□□□ 0.02
ACTN1-202ENST00000376839 CCDC82Q8N4S0 544 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 MAGEB6Q8N7X4 407 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 ZKSCAN3Q9BRR0 538 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 NAPBQ9H115 298 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 STK36Q9NRP7 1315 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
ACTN1-202ENST00000376839 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 STARD3NLO95772 234 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 TERF2Q15554 542 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 ALX1Q15699 326 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 DIS3L2Q8IYB7 885 aaKnown RBP15.19■□□□□ 0.02
ACTN1-202ENST00000376839 GRAMD1CQ8IYS0 662 aa15.19■□□□□ 0.02
ACTN1-202ENST00000376839 LRP6O75581 1613 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 CCP110O43303 1012 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 PRKAB2O43741 272 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 MMP1P03956 469 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 TUBB4AP04350 444 aa15.18■□□□□ 0.02
ACTN1-202ENST00000376839 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
ACTN1-202ENST00000376839 FAM177A1Q8N128 213 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms