RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 PGBD1Q96JS3 809 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 MRVI1Q9Y6F6 885 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 SCNN1DP51172 638 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 FILIP1LQ4L180 1135 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 FAM196AQ6ZSG2 479 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 C11orf57Q6ZUT1 292 aaPredicted RBP12.77□□□□□ -0.36
HDAC6-203ENST00000376619 TBC1D10CQ8IV04 446 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 GPKOWQ92917 476 aaPredicted RBP eCLIP12.77□□□□□ -0.361e-6■□□□□ 11.3
HDAC6-203ENST00000376619 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.36
HDAC6-203ENST00000376619 PFKFB2O60825 505 aa12.77□□□□□ -0.37
HDAC6-203ENST00000376619 CCT6AP40227 531 aaKnown RBP12.77□□□□□ -0.37
HDAC6-203ENST00000376619 BAG6P46379 1132 aa12.77□□□□□ -0.37
HDAC6-203ENST00000376619 DOK7Q18PE1 504 aa12.77□□□□□ -0.37
HDAC6-203ENST00000376619 RAD51AP2Q09MP3 1159 aa12.77□□□□□ -0.37
HDAC6-203ENST00000376619 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
HDAC6-203ENST00000376619 CLSTN2Q9H4D0 955 aa12.77□□□□□ -0.37
HDAC6-203ENST00000376619 TRIM75PA6NK02 468 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 CYP19A1P11511 503 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 PRDX5P30044 214 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 TFAP4Q01664 338 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 KARSQ15046 597 aaKnown RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 SEC63Q9UGP8 760 aaKnown RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 TNKSO95271 1327 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 EIF5P55010 431 aaKnown RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 CCDC47Q96A33 483 aaKnown RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 DYNLL2Q96FJ2 89 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 DNAI1Q9UI46 699 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 CYP2D6P10635 497 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 LONRF3Q496Y0 759 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 CYB5R4Q7L1T6 521 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 SMYD4Q8IYR2 804 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 FBXO18Q8NFZ0 1043 aa12.76□□□□□ -0.37
HDAC6-203ENST00000376619 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 CTDP1Q9Y5B0 961 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-203ENST00000376619 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
HDAC6-203ENST00000376619 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-203ENST00000376619 RFX5P48382 616 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-203ENST00000376619 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
HDAC6-203ENST00000376619 KCNH3Q9ULD8 1083 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 SMIM22K7EJ46 135 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 CTAGE5O15320 804 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 OFD1O75665 1012 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 BAG3O95817 575 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 PPARAQ07869 468 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 VPS72Q15906 364 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 LETM2Q2VYF4 491 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 RRAGBQ5VZM2 374 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 ZNF654Q8IZM8 581 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 CNNM2Q9H8M5 875 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 PFKFB1P16118 471 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 ADD2P35612 726 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 GTF2IP78347 998 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 DEFB132Q7Z7B7 95 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 TCEAL9Q9UHQ7 104 aa12.75□□□□□ -0.37
HDAC6-203ENST00000376619 CCDC178Q5BJE1 867 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 JAKMIP3Q5VZ66 844 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 USP17L8P0C7I0 530 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 NAPAP54920 295 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 TEX35Q5T0J7 233 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 MAGEC2Q9UBF1 373 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-203ENST00000376619 ZNF609O15014 1411 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 SLC44A5Q8NCS7 719 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-203ENST00000376619 LZTFL1Q9NQ48 299 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 MEGF6O75095 1541 aa12.74□□□□□ -0.37
HDAC6-203ENST00000376619 N4BP3O15049 544 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 IL6STP40189 918 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-203ENST00000376619 TNNI2P48788 182 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 SHPRHQ149N8 1683 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 EPS15P42566 896 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 PARP10Q53GL7 1025 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 CDC27P30260 824 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 GNG11P61952 73 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 SPTY2D1Q68D10 685 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-203ENST00000376619 SYT10Q6XYQ8 523 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 XPO4Q9C0E2 1151 aaKnown RBP12.73□□□□□ -0.37
HDAC6-203ENST00000376619 SERTAD1Q9UHV2 236 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 ZNF76P36508 570 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 PPARDQ03181 441 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
HDAC6-203ENST00000376619 DRC1Q96MC2 740 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 CCDC43Q96MW1 224 aaKnown RBP12.73□□□□□ -0.37
HDAC6-203ENST00000376619 VPS16Q9H269 839 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 CEP131Q9UPN4 1083 aa12.73□□□□□ -0.37
HDAC6-203ENST00000376619 CARMIL3Q8ND23 1372 aa12.72□□□□□ -0.37
HDAC6-203ENST00000376619 DDIT3P35638 169 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms