RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 TCP10Q12799 353 aa15.07■□□□□ 0
LSM2-208ENST00000375661 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
LSM2-208ENST00000375661 SLAIN1Q8ND83 568 aa15.07■□□□□ 0
LSM2-208ENST00000375661 MEIS3Q99687 375 aa15.07■□□□□ 0
LSM2-208ENST00000375661 GNL3LQ9NVN8 582 aaKnown RBP15.07■□□□□ 0
LSM2-208ENST00000375661 SLC45A1Q9Y2W3 748 aa15.07■□□□□ 0
LSM2-208ENST00000375661 PHIPQ8WWQ0 1821 aa15.07■□□□□ 0
LSM2-208ENST00000375661 SEMA3EO15041 775 aa15.06■□□□□ 0
LSM2-208ENST00000375661 LDHBP07195 334 aaKnown RBP15.06■□□□□ 0
LSM2-208ENST00000375661 MS4A1P11836 297 aa15.06■□□□□ 0
LSM2-208ENST00000375661 RFX5P48382 616 aaPredicted RBP15.06■□□□□ 0
LSM2-208ENST00000375661 PDE3AQ14432 1141 aa15.06■□□□□ 0
LSM2-208ENST00000375661 FASTKD5Q7L8L6 764 aaKnown RBP15.06■□□□□ 0
LSM2-208ENST00000375661 RNF208Q9H0X6 261 aa15.06■□□□□ 0
LSM2-208ENST00000375661 NR2E3Q9Y5X4 410 aa15.06■□□□□ 0
LSM2-208ENST00000375661 TRIOBPQ9H2D6 2365 aa15.06■□□□□ 0
LSM2-208ENST00000375661 ENTPD3O75355 529 aa15.05■□□□□ -0
LSM2-208ENST00000375661 CIAO1O76071 339 aa15.05■□□□□ -0
LSM2-208ENST00000375661 PRDX5P30044 214 aa15.05■□□□□ -0
LSM2-208ENST00000375661 PRKCZQ05513 592 aa15.05■□□□□ -0
LSM2-208ENST00000375661 NFIAQ12857 509 aa15.05■□□□□ -0
LSM2-208ENST00000375661 GPAT2Q6NUI2 795 aa15.05■□□□□ -0
LSM2-208ENST00000375661 ITPRIPQ8IWB1 547 aa15.05■□□□□ -0
LSM2-208ENST00000375661 USP40Q9NVE5 1235 aa15.05■□□□□ -0
LSM2-208ENST00000375661 RBM27Q9P2N5 1060 aaKnown RBP15.05■□□□□ -0
LSM2-208ENST00000375661 BIN2Q9UBW5 565 aaPredicted RBP15.05■□□□□ -0
LSM2-208ENST00000375661 FAM198AQ9UFP1 575 aa15.05■□□□□ -0
LSM2-208ENST00000375661 DENND2AQ9ULE3 1009 aa15.05■□□□□ -0
LSM2-208ENST00000375661 ATRNL1Q5VV63 1379 aa15.05■□□□□ -0
LSM2-208ENST00000375661 A0A0G2JLL6 359 aaPredicted RBP15.04■□□□□ -0
LSM2-208ENST00000375661 ZBTB7BO15156 539 aaPredicted RBP15.04■□□□□ -0
LSM2-208ENST00000375661 DIXDC1Q155Q3 683 aa15.04■□□□□ -0
LSM2-208ENST00000375661 PRRT2Q7Z6L0 340 aaPredicted RBP15.04■□□□□ -0
LSM2-208ENST00000375661 SCYL3Q8IZE3 742 aa15.04■□□□□ -0
LSM2-208ENST00000375661 ZGPATQ8N5A5 531 aaKnown RBP15.04■□□□□ -0
LSM2-208ENST00000375661 PXYLP1Q8TE99 480 aa15.04■□□□□ -0
LSM2-208ENST00000375661 U2AF1L4Q8WU68 220 aaKnown RBP15.04■□□□□ -0
LSM2-208ENST00000375661 IDI2Q9BXS1 227 aa15.04■□□□□ -0
LSM2-208ENST00000375661 PRO3102Q9H379 93 aa15.04■□□□□ -0
LSM2-208ENST00000375661 PICK1Q9NRD5 415 aa15.04■□□□□ -0
LSM2-208ENST00000375661 COG6Q9Y2V7 657 aa15.04■□□□□ -0
LSM2-208ENST00000375661 A0A1W2PPC1 479 aa15.03■□□□□ -0
LSM2-208ENST00000375661 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
LSM2-208ENST00000375661 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
LSM2-208ENST00000375661 SGPL1O95470 568 aa15.03■□□□□ -0
LSM2-208ENST00000375661 UBTFL1P0CB47 393 aaPredicted RBP15.03■□□□□ -0
LSM2-208ENST00000375661 MAP3K10Q02779 954 aa15.03■□□□□ -0
LSM2-208ENST00000375661 IRF5Q13568 498 aa15.03■□□□□ -0
LSM2-208ENST00000375661 MVPQ14764 893 aaKnown RBP15.03■□□□□ -0
LSM2-208ENST00000375661 ATP2B3Q16720 1220 aa15.03■□□□□ -0
LSM2-208ENST00000375661 ATG9AQ7Z3C6 839 aa15.03■□□□□ -0
LSM2-208ENST00000375661 CEP126Q9P2H0 1117 aa15.03■□□□□ -0
LSM2-208ENST00000375661 SUPT16HQ9Y5B9 1047 aaKnown RBP15.03■□□□□ -0
LSM2-208ENST00000375661 DOCK3Q8IZD9 2030 aa15.02■□□□□ -0
LSM2-208ENST00000375661 GAKO14976 1311 aa15.02■□□□□ -0
LSM2-208ENST00000375661 ADCY3O60266 1144 aa15.02■□□□□ -0
LSM2-208ENST00000375661 FARP2O94887 1054 aaPredicted RBP15.02■□□□□ -0
LSM2-208ENST00000375661 GNAI3P08754 354 aa15.02■□□□□ -0
LSM2-208ENST00000375661 CYP2C8P10632 490 aa15.02■□□□□ -0
LSM2-208ENST00000375661 PTPRAP18433 802 aa15.02■□□□□ -0
LSM2-208ENST00000375661 SLF2Q8IX21 1173 aa15.02■□□□□ -0
LSM2-208ENST00000375661 HDAC5Q9UQL6 1122 aa15.02■□□□□ -0
LSM2-208ENST00000375661 AFG3L2Q9Y4W6 797 aa15.02■□□□□ -0
LSM2-208ENST00000375661 ZHX2Q9Y6X8 837 aa15.02■□□□□ -0
LSM2-208ENST00000375661 RFX7Q2KHR2 1363 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 PDS5AQ29RF7 1337 aaKnown RBP15.01□□□□□ -0.01
LSM2-208ENST00000375661 CTNND1O60716 968 aaKnown RBP15.01□□□□□ -0.01
LSM2-208ENST00000375661 RGS3P49796 1198 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 UNC93B1Q9H1C4 597 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 GABRQQ9UN88 632 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 LRRFIP2Q9Y608 721 aaKnown RBP15.01□□□□□ -0.01
LSM2-208ENST00000375661 ATAD5Q96QE3 1844 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 LOC285556D6RIA3 1793 aa15.01□□□□□ -0.01
LSM2-208ENST00000375661 ALPK3Q96L96 1907 aa15□□□□□ -0.01
LSM2-208ENST00000375661 FLT3LGP49771 235 aa15□□□□□ -0.01
LSM2-208ENST00000375661 GADL1Q6ZQY3 521 aa15□□□□□ -0.01
LSM2-208ENST00000375661 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
LSM2-208ENST00000375661 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
LSM2-208ENST00000375661 TNPO2O14787 897 aaKnown RBP14.99□□□□□ -0.01
LSM2-208ENST00000375661 GNAI2P04899 355 aa14.99□□□□□ -0.01
LSM2-208ENST00000375661 IL15P40933 162 aaPredicted RBP14.99□□□□□ -0.01
LSM2-208ENST00000375661 ZSCAN29Q8IWY8 852 aaPredicted RBP14.99□□□□□ -0.01
LSM2-208ENST00000375661 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
LSM2-208ENST00000375661 PAK6Q9NQU5 681 aaPredicted RBP14.99□□□□□ -0.01
LSM2-208ENST00000375661 PNMA3Q9UL41 463 aa14.99□□□□□ -0.01
LSM2-208ENST00000375661 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
LSM2-208ENST00000375661 TBC1D12O60347 775 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 EVI5O60447 810 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 NPM3O75607 178 aaKnown RBP14.98□□□□□ -0.01
LSM2-208ENST00000375661 INHAP05111 366 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 PHKA1P46020 1223 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 SPTY2D1Q68D10 685 aaPredicted RBP14.98□□□□□ -0.01
LSM2-208ENST00000375661 DZIP1Q86YF9 867 aaKnown RBP14.98□□□□□ -0.01
LSM2-208ENST00000375661 COA7Q96BR5 231 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 CRISPLD2Q9H0B8 497 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 C1orf115Q9H7X2 142 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 AGTPBP1Q9UPW5 1226 aa14.98□□□□□ -0.01
LSM2-208ENST00000375661 MAP4K4O95819 1239 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms