RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 V9GY48 417 aaPredicted RBP16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 SPOPO43791 374 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 KRT83P78385 493 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 BMP15O95972 392 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 KRT222Q8N1A0 295 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 PPIP5K2O43314 1243 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 RDH13Q8NBN7 331 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 EYA1Q99502 592 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 M0QZ92 97 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 NAA25Q14CX7 972 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 C17orf53Q8N3J3 647 aaPredicted RBP16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 MICAL1Q8TDZ2 1067 aa16.5■□□□□ 0.23
NOTCH4-201ENST00000375023 LMBR1Q8WVP7 490 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 GNA11P29992 359 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 LRMPQ12912 555 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 PSMD6Q15008 389 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 WDR44Q5JSH3 913 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 EPB41P11171 864 aaKnown RBP16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 DHX32Q7L7V1 743 aaKnown RBP16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 POLR2DO15514 142 aaKnown RBP16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 A1BGP04217 495 aa16.49■□□□□ 0.23
NOTCH4-201ENST00000375023 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 GNAT2P19087 354 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 C4orf50Q6ZRC1 276 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 VIMP08670 466 aaKnown RBP16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 EYA3Q99504 573 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 HSPA1LP34931 641 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 SEL1L2Q5TEA6 688 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 HINFPQ9BQA5 517 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 OPA1O60313 960 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 PLCH2O75038 1416 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 B4DLN1 442 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 PRPHP41219 470 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 ANKS4BQ8N8V4 417 aa16.48■□□□□ 0.23
NOTCH4-201ENST00000375023 MAPKAPK5Q8IW41 473 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 TNFAIP3P21580 790 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 SPAG1Q07617 926 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 CHMLP26374 656 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 HIBADHP31937 336 aaKnown RBP16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 TRPC3Q13507 836 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 ANAPC4Q9UJX5 808 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 PLEKHM2Q8IWE5 1019 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 MYO1AQ9UBC5 1043 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 DHX29Q7Z478 1369 aaKnown RBP16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 CSADQ9Y600 493 aa16.47■□□□□ 0.23
NOTCH4-201ENST00000375023 SLU7O95391 586 aaKnown RBP16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 BSPRYQ5W0U4 402 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 CCT6BQ92526 530 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 GTPBP4Q9BZE4 634 aaKnown RBP16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 GCP02774 474 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 TGFBRAP1Q8WUH2 860 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 DYNC1I1O14576 645 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 STX10O60499 249 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 PLCG2P16885 1265 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 U2AF2P26368 475 aaKnown RBP eCLIP16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 INF2Q27J81 1249 aa16.46■□□□□ 0.23
NOTCH4-201ENST00000375023 CFBP00751 764 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 C8orf34Q49A92 452 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 SEPT14Q6ZU15 432 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 LINS1Q8NG48 757 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 ANKRD2Q9GZV1 360 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 SPC25Q9HBM1 224 aa16.46■□□□□ 0.22
NOTCH4-201ENST00000375023 METTL13Q8N6R0 699 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 BAG1Q99933 345 aaPredicted RBP16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 NSMFQ6X4W1 530 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 IQUBQ8NA54 791 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 FAM204AQ9H8W3 233 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 TBC1D8BQ0IIM8 1120 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 STRN3Q13033 797 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 HOXC9P31274 260 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 EPSTI1Q96J88 318 aa16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
NOTCH4-201ENST00000375023 IL16Q14005 1332 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms