RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 VPS37CA5D8V6 355 aaPredicted RBP14.73□□□□□ -0.05
PRPF4-202ENST00000374199 LETM1O95202 739 aaPredicted RBP14.73□□□□□ -0.05
PRPF4-202ENST00000374199 PRDX5P30044 214 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 MIGA1Q8NAN2 632 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 TFCP2L1Q9NZI6 479 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 RANBP6O60518 1105 aaKnown RBP14.73□□□□□ -0.05
PRPF4-202ENST00000374199 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
PRPF4-202ENST00000374199 ZNF804AQ7Z570 1209 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 TMTC2Q8N394 836 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 TBC1D16Q8TBP0 767 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 ANKS1AQ92625 1134 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 POLLQ9UGP5 575 aa14.73□□□□□ -0.05
PRPF4-202ENST00000374199 DYNLL1P63167 89 aaKnown RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 FUT2Q10981 343 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 RPGRQ92834 1020 aaKnown RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 SYAP1Q96A49 352 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 RTFDC1Q9BY42 306 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 INCENPQ9NQS7 918 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 RAI14Q9P0K7 980 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 IFNAR1P17181 557 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 NOVP48745 357 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 SLX4Q8IY92 1834 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 PDLIM2Q96JY6 352 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 CD209Q9NNX6 404 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 IQSEC3Q9UPP2 1182 aaPredicted RBP14.72□□□□□ -0.05
PRPF4-202ENST00000374199 SUGT1Q9Y2Z0 365 aa14.72□□□□□ -0.05
PRPF4-202ENST00000374199 DTNBO60941 627 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 VPS37DQ86XT2 251 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 SDR42E1Q8WUS8 393 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 PGBD1Q96JS3 809 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 MROH7-TTC4A0A0A0MT08 1334 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 KDM4AO75164 1064 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 FMNL1O95466 1100 aaPredicted RBP14.71□□□□□ -0.05
PRPF4-202ENST00000374199 NASPP49321 788 aaPredicted RBP14.71□□□□□ -0.05
PRPF4-202ENST00000374199 RTEL1Q9NZ71 1219 aa14.71□□□□□ -0.05
PRPF4-202ENST00000374199 U2AF2P26368 475 aaKnown RBP eCLIP14.71□□□□□ -0.062e-8■■■■■ 36.5
PRPF4-202ENST00000374199 TDO2P48775 406 aa14.71□□□□□ -0.06
PRPF4-202ENST00000374199 BRAPQ7Z569 592 aa14.71□□□□□ -0.06
PRPF4-202ENST00000374199 RBSNQ9H1K0 784 aa14.71□□□□□ -0.06
PRPF4-202ENST00000374199 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 CDKL5O76039 1030 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 APPP05067 770 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 NPR1P16066 1061 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 CAMKK2Q96RR4 588 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 PANK2Q9BZ23 570 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 ABCF2Q9UG63 623 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 BRCA1P38398 1863 aaKnown RBP14.7□□□□□ -0.06
PRPF4-202ENST00000374199 RXRBP28702 533 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 METAP2P50579 478 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRPF4-202ENST00000374199 GRIK5Q16478 980 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 POLR3EQ9NVU0 708 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 GGA1Q9UJY5 639 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 CFAP45Q9UL16 551 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 ZBTB43O43298 467 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 GSTO1P78417 241 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 FGD1P98174 961 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 TMEM67Q5HYA8 995 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 DDX11Q96FC9 970 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 MAP3K14Q99558 947 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 TCP11L1Q9NUJ3 509 aa14.7□□□□□ -0.06
PRPF4-202ENST00000374199 SMIM22K7EJ46 135 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 KIF23Q02241 960 aaPredicted RBP14.69□□□□□ -0.06
PRPF4-202ENST00000374199 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 CRNKL1Q9BZJ0 848 aaKnown RBP14.69□□□□□ -0.06
PRPF4-202ENST00000374199 SCN9AQ15858 1988 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 PLIN4Q96Q06 1357 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 PPEF1O14829 653 aaPredicted RBP14.69□□□□□ -0.06
PRPF4-202ENST00000374199 FIBPO43427 364 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 ESR2Q92731 530 aa14.69□□□□□ -0.06
PRPF4-202ENST00000374199 C12orf60Q5U649 245 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 FAM173BQ6P4H8 233 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-202ENST00000374199 ANKIB1Q9P2G1 1089 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 FAM237AA0A1B0GTK4 181 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 SYCE3A1L190 88 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 FERMT3Q86UX7 667 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 ENGASEQ8NFI3 743 aa14.68□□□□□ -0.06
PRPF4-202ENST00000374199 ZSCAN10Q96SZ4 725 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-202ENST00000374199 FKBP1AP62942 108 aaKnown RBP14.68□□□□□ -0.06
PRPF4-202ENST00000374199 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
PRPF4-202ENST00000374199 KIF28PB7ZC32 967 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 APBA3O96018 575 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 LDHBP07195 334 aaKnown RBP14.67□□□□□ -0.06
PRPF4-202ENST00000374199 RHBDL3P58872 404 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 TROAPQ12815 778 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 STYK1Q6J9G0 422 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 TBC1D22AQ8WUA7 517 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 MYH8P13535 1937 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 DDAH1O94760 285 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 YEATS4O95619 227 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 SPATA32Q96LK8 384 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 COA1Q9GZY4 146 aa14.67□□□□□ -0.06
PRPF4-202ENST00000374199 A0A1W2PQ27 194 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 A0A1W2PQ64 194 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 A0A1W2PQD8 194 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 H3BQV1 296 aa14.66□□□□□ -0.06
PRPF4-202ENST00000374199 IFIT3O14879 490 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms