RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 ST5P78524 1137 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CKAP4Q07065 602 aaKnown RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 KLHDC4Q8TBB5 520 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 TTC14Q96N46 770 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 USP26Q9BXU7 913 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 RANBP1P43487 201 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CPLX4Q7Z7G2 160 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 PNMA8AQ86V59 439 aaPredicted RBP7.45□□□□□ -1.22
CHD6-203ENST00000373233 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 HMG20BQ9P0W2 317 aa7.45□□□□□ -1.22
CHD6-203ENST00000373233 CTAGE9A4FU28 777 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 MAP3K12Q12852 859 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 SPECC1Q5M775 1068 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 CCDC174Q6PII3 467 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 CCDC186Q7Z3E2 898 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 PIGBQ92521 554 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 TNNI3KQ59H18 835 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 FPGT-TNNI3KV9GXZ4 949 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 PHRF1Q9P1Y6 1649 aaKnown RBP7.44□□□□□ -1.22
CHD6-203ENST00000373233 PTGS1P23219 599 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 SH3TC1Q8TE82 1336 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 ARMCX6Q7L4S7 300 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 STMN2Q93045 179 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 SLMAPQ14BN4 828 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 CCDC40Q4G0X9 1142 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 HMGB1P1B2RPK0 211 aaPredicted RBP7.44□□□□□ -1.22
CHD6-203ENST00000373233 CCDC178Q5BJE1 867 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 RTCBQ9Y3I0 505 aaKnown RBP7.44□□□□□ -1.22
CHD6-203ENST00000373233 MATR3P43243 847 aaKnown RBP eCLIP7.44□□□□□ -1.226e-7■■□□□ 14.3
CHD6-203ENST00000373233 EFCAB13Q8IY85 973 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 PDCD7Q8N8D1 485 aaKnown RBP7.44□□□□□ -1.22
CHD6-203ENST00000373233 USP6NLQ92738 828 aa7.44□□□□□ -1.22
CHD6-203ENST00000373233 STMN4Q9H169 189 aaPredicted RBP7.44□□□□□ -1.22
CHD6-203ENST00000373233 ZNF500O60304 480 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 CCDC129Q6ZRS4 1044 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 ABTB1Q969K4 478 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 NAA15Q9BXJ9 866 aaKnown RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 THRAP3Q9Y2W1 955 aaKnown RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 RAD50Q92878 1312 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 TRPM3Q9HCF6 1732 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 CEMIPQ8WUJ3 1361 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 RHOXF2BP0C7M4 288 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 CRKLP46109 303 aaKnown RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 ZNF165P49910 485 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 FAM89AQ96GI7 184 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 ZNF594Q96JF6 807 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 ADCY9O60503 1353 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 GOLGA6CA6NDK9 693 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 GOLGA6DP0CG33 693 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 TBC1D31Q96DN5 1066 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 NUP88Q99567 741 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 GOLGA6AQ9NYA3 693 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 EYA2O00167 538 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 DNA2P51530 1060 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 PDCD2Q16342 344 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 LIMCH1Q9UPQ0 1083 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 MAP3K15Q6ZN16 1313 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 TCIRG1Q13488 830 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 POLA2Q14181 598 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 UNC5CLQ8IV45 518 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 TRIM6Q9C030 488 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 COL14A1Q05707 1796 aaKnown RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 UQCRFS1P1P0C7P4 283 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 CETN3O15182 167 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 COG7P83436 770 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 PARP10Q53GL7 1025 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 MIER3Q7Z3K6 550 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 VCX3BQ9H321 246 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 CIB2O75838 187 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 IRX1P78414 480 aaPredicted RBP7.43□□□□□ -1.22
CHD6-203ENST00000373233 SETDB1Q15047 1291 aa7.43□□□□□ -1.22
CHD6-203ENST00000373233 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHD6-203ENST00000373233 MYO1CO00159 1063 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 CASQ2O14958 399 aaPredicted RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 ITGA6P23229 1130 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 ARMC9Q7Z3E5 817 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 RASEFQ8IZ41 740 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 SYT10Q6XYQ8 523 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 COL5A2P05997 1499 aaPredicted RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 CCDC69A6NI79 296 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 HPDP32754 393 aaPredicted RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 GOLGA4Q13439 2230 aaKnown RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 RNF113AO15541 343 aaKnown RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 PPP1R12BO60237 982 aaPredicted RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 KDM4AO75164 1064 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 YEATS4O95619 227 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 CHMP4BP1P59074 171 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 TRAPPC3LQ5T215 181 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 ABCF2Q9UG63 623 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 ROBO1Q9Y6N7 1651 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 GSTTP1A0A1W2PQM5 241 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 CTSWP56202 376 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 ZBTB22O15209 634 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 EVCP57679 992 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 GBP7Q8N8V2 638 aaPredicted RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 SATB2Q9UPW6 733 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms