RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 TMX4Q9H1E5 349 aaPredicted RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 VPS16Q9H269 839 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 STAP2Q9UGK3 403 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 LUC7L2Q9Y383 392 aaKnown RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 ACEP12821 1306 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 NEFHP12036 1026 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 KCNJ6P48051 423 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 HAND2P61296 217 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 LACTBP83111 547 aaPredicted RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 LMNTD2Q8IXW0 634 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 IKBKBO14920 756 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 BEND6Q5SZJ8 279 aaPredicted RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
SYNPO2L-201ENST00000372873 IRAK1P51617 712 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 SAMD15Q9P1V8 674 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 KCNH3Q9ULD8 1083 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 PI4KAP2A4QPH2 592 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 TMEM232C9JQI7 657 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 PI4KAP1Q8N8J0 262 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 TANGO6Q9C0B7 1094 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 WWC3Q9ULE0 1092 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 MADDQ8WXG6 1647 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 MXRA7P84157 204 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 UBXN1Q04323 297 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 CCDC6Q16204 474 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 TTC39AQ5SRH9 613 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 CCDC170Q8IYT3 715 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 USHBP1Q8N6Y0 703 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 CEP131Q9UPN4 1083 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 RIMS2Q9UQ26 1411 aa12.62□□□□□ -0.39
SYNPO2L-201ENST00000372873 ANXA1P04083 346 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 RESTQ13127 1097 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 RNF217Q8TC41 542 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 SELENOSQ9BQE4 189 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 AMOTL2Q9Y2J4 779 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 MYOM2P54296 1465 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 SPAG1Q07617 926 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 TDRD12Q587J7 1177 aaKnown RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 MLKLQ8NB16 471 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 PIK3R5Q8WYR1 880 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 L1RE1Q9UN81 338 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 TLDC2A0PJX2 215 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 MYO1EQ12965 1108 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 GKAP1Q5VSY0 366 aaPredicted RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 CAPRIN2Q6IMN6 1127 aaKnown RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 GSPT2Q8IYD1 628 aaKnown RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 THOC1Q96FV9 657 aaKnown RBP12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 CCDC42Q96M95 316 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 KCNG1Q9UIX4 513 aa12.61□□□□□ -0.39
SYNPO2L-201ENST00000372873 HGSO14964 777 aaPredicted RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 VIMP08670 466 aaKnown RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ATP11AP98196 1134 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 CRYMQ14894 314 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ZNF827Q17R98 1081 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 JAKMIP2Q96AA8 810 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 TET3O43151 1660 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 MYO1BO43795 1136 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 GUCY2FP51841 1108 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ACRBPQ8NEB7 543 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 MIEF2Q96C03 454 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 SELENOOQ9BVL4 669 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 TPX2Q9ULW0 747 aaKnown RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 GNPTABQ3T906 1256 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 FBF1Q8TES7 1133 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 SUDS3Q9H7L9 328 aaPredicted RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 STK38LQ9Y2H1 464 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 NNTQ13423 1086 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 IFT20Q8IY31 132 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 NSRP1Q9H0G5 558 aaKnown RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 ACTR5Q9H9F9 607 aaPredicted RBP12.6□□□□□ -0.39
SYNPO2L-201ENST00000372873 LRRD1A4D1F6 860 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 EPS15P42566 896 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 AMOTL1Q8IY63 956 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 PNKPQ96T60 521 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
SYNPO2L-201ENST00000372873 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms