RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MKRN1Q9UHC7 482 aaKnown RBP20.61■□□□□ 0.89
SSBP3-203ENST00000371319 PTPDC1A2A3K4 754 aa20.6■□□□□ 0.89
SSBP3-203ENST00000371319 GOLGA8BA8MQT2 603 aa20.6■□□□□ 0.89
SSBP3-203ENST00000371319 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
SSBP3-203ENST00000371319 RRP12Q5JTH9 1297 aaKnown RBP20.6■□□□□ 0.89
SSBP3-203ENST00000371319 CHMP4CQ96CF2 233 aa20.6■□□□□ 0.89
SSBP3-203ENST00000371319 FAM163AQ96GL9 167 aaPredicted RBP20.6■□□□□ 0.89
SSBP3-203ENST00000371319 GAKO14976 1311 aa20.6■□□□□ 0.89
SSBP3-203ENST00000371319 DDX60LQ5H9U9 1706 aaKnown RBP20.6■□□□□ 0.89
SSBP3-203ENST00000371319 GPR75-ASB3A0A0A6YYF3 556 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 BAG3O95817 575 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 EVX2Q03828 476 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 TMEM67Q5HYA8 995 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 SGMS1Q86VZ5 419 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 CERS5Q8N5B7 392 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 MTA3Q9BTC8 594 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 ZNF219Q9P2Y4 722 aaPredicted RBP20.59■□□□□ 0.89
SSBP3-203ENST00000371319 ARPP21Q9UBL0 812 aaPredicted RBP20.59■□□□□ 0.89
SSBP3-203ENST00000371319 VPS37CA5D8V6 355 aaPredicted RBP20.59■□□□□ 0.89
SSBP3-203ENST00000371319 CYP2D6P10635 497 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 LIFRP42702 1097 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 BTDP43251 543 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 HMGN5P82970 282 aaKnown RBP20.59■□□□□ 0.89
SSBP3-203ENST00000371319 NOL10Q9BSC4 688 aaKnown RBP20.59■□□□□ 0.89
SSBP3-203ENST00000371319 TOMM22Q9NS69 142 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.59■□□□□ 0.893e-6■■■□□ 18.4
SSBP3-203ENST00000371319 SUGT1Q9Y2Z0 365 aa20.59■□□□□ 0.89
SSBP3-203ENST00000371319 FOCADQ5VW36 1801 aa20.58■□□□□ 0.89
SSBP3-203ENST00000371319 IFIT3O14879 490 aaKnown RBP20.58■□□□□ 0.88
SSBP3-203ENST00000371319 PCP11498 1178 aaKnown RBP20.58■□□□□ 0.88
SSBP3-203ENST00000371319 CDC37L1Q7L3B6 337 aa20.58■□□□□ 0.88
SSBP3-203ENST00000371319 RAB11FIP4Q86YS3 637 aa20.58■□□□□ 0.88
SSBP3-203ENST00000371319 TCHHQ07283 1943 aa20.57■□□□□ 0.88
SSBP3-203ENST00000371319 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
SSBP3-203ENST00000371319 APOA5Q6Q788 366 aa20.57■□□□□ 0.88
SSBP3-203ENST00000371319 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
SSBP3-203ENST00000371319 SLF2Q8IX21 1173 aa20.57■□□□□ 0.88
SSBP3-203ENST00000371319 FBXW7Q969H0 707 aa20.57■□□□□ 0.88
SSBP3-203ENST00000371319 USP17L8P0C7I0 530 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 USP5P45974 858 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 ESR2Q92731 530 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 SCN9AQ15858 1988 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 ADAMTSL1Q8N6G6 1762 aa20.56■□□□□ 0.88
SSBP3-203ENST00000371319 ORC4O43929 436 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 PRPF40AO75400 957 aaKnown RBP20.55■□□□□ 0.88
SSBP3-203ENST00000371319 FDPSP14324 419 aaKnown RBP20.55■□□□□ 0.88
SSBP3-203ENST00000371319 RHBDL3P58872 404 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 GSE1Q14687 1217 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
SSBP3-203ENST00000371319 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
SSBP3-203ENST00000371319 PODNQ7Z5L7 613 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 ZKSCAN3Q9BRR0 538 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 MXD3Q9BW11 206 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 DBNDD1Q9H9R9 158 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 MCM9Q9NXL9 1143 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 NID2Q14112 1375 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 ECM29Q5VYK3 1845 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 G3V3G9 751 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 KCNA3P22001 575 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 SEC23AQ15436 765 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 DCAF8Q5TAQ9 597 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 C12orf60Q5U649 245 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 NFXL1Q6ZNB6 911 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 TGFBRAP1Q8WUH2 860 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 DAGLAQ9Y4D2 1042 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 ROBO3Q96MS0 1386 aa20.55■□□□□ 0.88
SSBP3-203ENST00000371319 DHX16O60231 1041 aaKnown RBP20.54■□□□□ 0.88
SSBP3-203ENST00000371319 PRDM1O75626 825 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 DPEP1P16444 411 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 PLCG2P16885 1265 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 METAP2P50579 478 aaKnown RBP eCLIP20.54■□□□□ 0.881e-6■■■□□ 15.4
SSBP3-203ENST00000371319 WTAPQ15007 396 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
SSBP3-203ENST00000371319 KCNQ5Q9NR82 932 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
SSBP3-203ENST00000371319 CCDC69A6NI79 296 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 ZBTB43O43298 467 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 C21orf2O43822 256 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 ECE2O60344 883 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 SLC3A2P08195 630 aaKnown RBP20.53■□□□□ 0.88
SSBP3-203ENST00000371319 TEX11Q8IYF3 940 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 TTLL6Q8N841 843 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 TMEM87AQ8NBN3 555 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 FAM217BQ9NTX9 383 aaPredicted RBP20.53■□□□□ 0.88
SSBP3-203ENST00000371319 CNPY2Q9Y2B0 182 aa20.53■□□□□ 0.88
SSBP3-203ENST00000371319 MYH1P12882 1939 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 RXRAP19793 462 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 CDC27P30260 824 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 FKBP1AP62942 108 aaKnown RBP20.52■□□□□ 0.88
SSBP3-203ENST00000371319 KLHL40Q2TBA0 621 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 MAPKAPK5Q8IW41 473 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 UBAC1Q9BSL1 405 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 KIF3AQ9Y496 699 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 SLC12A7Q9Y666 1083 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 MYH15Q9Y2K3 1946 aa20.52■□□□□ 0.88
SSBP3-203ENST00000371319 TNKSO95271 1327 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms