RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 MIER1Q8N108 512 aa16.29■□□□□ 0.2
RPF1-201ENST00000370654 FAM163AQ96GL9 167 aaPredicted RBP16.29■□□□□ 0.2
RPF1-201ENST00000370654 ZNF333Q96JL9 665 aa16.29■□□□□ 0.2
RPF1-201ENST00000370654 MROH7-TTC4A0A0A0MT08 1334 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 PDHXO00330 501 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 IPO8O15397 1037 aaKnown RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 ENTPD3O75355 529 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 MYCP01106 439 aaPredicted RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 PICALMQ13492 652 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 MVPQ14764 893 aaKnown RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 ZCCHC17Q9NP64 241 aaKnown RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 AKAP2Q9Y2D5 859 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 KIAA0100Q14667 2235 aaKnown RBP16.28■□□□□ 0.2
RPF1-201ENST00000370654 DOCK2Q92608 1830 aa16.28■□□□□ 0.2
RPF1-201ENST00000370654 GPR75-ASB3A0A0A6YYF3 556 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 FAM196BA6NMK8 535 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 MCAMP43121 646 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 ANKRD23Q86SG2 305 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 ZGPATQ8N5A5 531 aaKnown RBP16.27■□□□□ 0.2
RPF1-201ENST00000370654 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 SH3TC2Q8TF17 1288 aa16.27■□□□□ 0.2
RPF1-201ENST00000370654 RBBP6Q7Z6E9 1792 aaKnown RBP16.27■□□□□ 0.19
RPF1-201ENST00000370654 CYP2C8P10632 490 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 RLBP1P12271 317 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 PTPRAP18433 802 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 POLA2Q14181 598 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 ZSCAN29Q8IWY8 852 aaPredicted RBP16.26■□□□□ 0.19
RPF1-201ENST00000370654 NSUN4Q96CB9 384 aaKnown RBP16.26■□□□□ 0.19
RPF1-201ENST00000370654 ZHX2Q9Y6X8 837 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 ARID4AP29374 1257 aaPredicted RBP16.26■□□□□ 0.19
RPF1-201ENST00000370654 G3BP1Q13283 466 aaKnown RBP eCLIP16.26■□□□□ 0.19
RPF1-201ENST00000370654 RRP1BQ14684 758 aaKnown RBP16.26■□□□□ 0.19
RPF1-201ENST00000370654 ZKSCAN2Q63HK3 967 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 SCYL3Q8IZE3 742 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
RPF1-201ENST00000370654 PHIPQ8WWQ0 1821 aa16.25■□□□□ 0.19
RPF1-201ENST00000370654 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
RPF1-201ENST00000370654 SLC9C1Q4G0N8 1177 aa16.25■□□□□ 0.19
RPF1-201ENST00000370654 SPTY2D1Q68D10 685 aaPredicted RBP16.25■□□□□ 0.19
RPF1-201ENST00000370654 DBNDD2Q9BQY9 259 aa16.25■□□□□ 0.19
RPF1-201ENST00000370654 AFG3L2Q9Y4W6 797 aa16.25■□□□□ 0.19
RPF1-201ENST00000370654 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
RPF1-201ENST00000370654 CXCL11O14625 94 aa16.24■□□□□ 0.19
RPF1-201ENST00000370654 PSMC4P43686 418 aa16.24■□□□□ 0.19
RPF1-201ENST00000370654 ATP8B2P98198 1209 aa16.24■□□□□ 0.19
RPF1-201ENST00000370654 GORABQ5T7V8 394 aa16.24■□□□□ 0.19
RPF1-201ENST00000370654 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
RPF1-201ENST00000370654 BCRP11274 1271 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 OSBPP22059 807 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 MTFR1Q15390 333 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 TNNI3KQ59H18 835 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 ADGRA1Q86SQ6 560 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 SLF2Q8IX21 1173 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 SSH3Q8TE77 659 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 RAI14Q9P0K7 980 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 FPGT-TNNI3KV9GXZ4 949 aa16.23■□□□□ 0.19
RPF1-201ENST00000370654 KIF22Q14807 665 aa16.22■□□□□ 0.19
RPF1-201ENST00000370654 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
RPF1-201ENST00000370654 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
RPF1-201ENST00000370654 PICK1Q9NRD5 415 aa16.22■□□□□ 0.19
RPF1-201ENST00000370654 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
RPF1-201ENST00000370654 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
RPF1-201ENST00000370654 DOCK1Q14185 1865 aa16.22■□□□□ 0.19
RPF1-201ENST00000370654 PTPRFP10586 1907 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 MYO5AQ9Y4I1 1855 aaKnown RBP16.21■□□□□ 0.19
RPF1-201ENST00000370654 TRIM75PA6NK02 468 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
RPF1-201ENST00000370654 CTNND1O60716 968 aaKnown RBP16.21■□□□□ 0.19
RPF1-201ENST00000370654 ARHGEF6Q15052 776 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 SLC4A8Q2Y0W8 1093 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 TMEM106CQ9BVX2 250 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
RPF1-201ENST00000370654 GABRQQ9UN88 632 aa16.21■□□□□ 0.19
RPF1-201ENST00000370654 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
RPF1-201ENST00000370654 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
RPF1-201ENST00000370654 FMNL1O95466 1100 aaPredicted RBP16.2■□□□□ 0.18
RPF1-201ENST00000370654 CYP2E1P05181 493 aaPredicted RBP16.2■□□□□ 0.18
RPF1-201ENST00000370654 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 JAG1P78504 1218 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 PIH1D3Q9NQM4 214 aaKnown RBP16.2■□□□□ 0.18
RPF1-201ENST00000370654 LRP2BPQ9P2M1 347 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 SIPA1L1O43166 1804 aa16.2■□□□□ 0.18
RPF1-201ENST00000370654 TBC1D12O60347 775 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 GSTO1P78417 241 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 PRKCZQ05513 592 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
RPF1-201ENST00000370654 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 TEX11Q8IYF3 940 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 SHISA4Q96DD7 197 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 PARK7Q99497 189 aaKnown RBP16.19■□□□□ 0.18
RPF1-201ENST00000370654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.18
RPF1-201ENST00000370654 GPR108Q9NPR9 543 aa16.19■□□□□ 0.18
RPF1-201ENST00000370654 AATFQ9NY61 560 aaKnown RBP eCLIP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 291.7 ms