RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CLASRPQ8N2M8 674 aaKnown RBP25.13■■□□□ 1.61
SMNDC1-201ENST00000369592 SNCAIPQ9Y6H5 919 aa25.13■■□□□ 1.61
SMNDC1-201ENST00000369592 INHBEP58166 350 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 PPP4CP60510 307 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 SREBF2Q12772 1141 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 DCAF15Q66K64 600 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 MS4A4AQ96JQ5 239 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 ELP3Q9H9T3 547 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 FOCADQ5VW36 1801 aa25.12■■□□□ 1.61
SMNDC1-201ENST00000369592 COL2A1P02458 1487 aaPredicted RBP25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 TNRC18O15417 2968 aaPredicted RBP25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 MIGA2Q7L4E1 593 aa25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 ADGRA1Q86SQ6 560 aa25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 CNKSR2Q8WXI2 1034 aa25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 ZNF341Q9BYN7 854 aa25.11■■□□□ 1.61
SMNDC1-201ENST00000369592 DDTLA6NHG4 134 aaPredicted RBP25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 OPTNQ96CV9 577 aa25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 WRNIP1Q96S55 665 aa25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 ANTXR1Q9H6X2 564 aa25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 DCTPP1Q9H773 170 aa25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 NDUFB9Q9Y6M9 179 aa25.1■■□□□ 1.61
SMNDC1-201ENST00000369592 SPDYE5A6NIY4 337 aa25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 PHF20L1A8MW92 1017 aa25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 APBB1O00213 710 aa25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 NOM1Q5C9Z4 860 aaKnown RBP25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 NAA16Q6N069 864 aaPredicted RBP25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 ZKSCAN4Q969J2 545 aaPredicted RBP25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 PCDHB15Q9Y5E8 787 aa25.09■■□□□ 1.61
SMNDC1-201ENST00000369592 IGF2BP3O00425 579 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMNDC1-201ENST00000369592 INPP5BP32019 993 aa25.08■■□□□ 1.61
SMNDC1-201ENST00000369592 IFNL1Q8IU54 200 aa25.08■■□□□ 1.61
SMNDC1-201ENST00000369592 PTPN18Q99952 460 aa25.08■■□□□ 1.61
SMNDC1-201ENST00000369592 CSADQ9Y600 493 aa25.08■■□□□ 1.61
SMNDC1-201ENST00000369592 NOL9Q5SY16 702 aaKnown RBP25.07■■□□□ 1.6
SMNDC1-201ENST00000369592 TMED8Q6PL24 325 aaPredicted RBP25.07■■□□□ 1.6
SMNDC1-201ENST00000369592 ERO1BQ86YB8 467 aa25.07■■□□□ 1.6
SMNDC1-201ENST00000369592 IFIT2P09913 472 aaKnown RBP25.06■■□□□ 1.6
SMNDC1-201ENST00000369592 SOX10P56693 466 aa25.06■■□□□ 1.6
SMNDC1-201ENST00000369592 SH3RF3Q8TEJ3 882 aaPredicted RBP25.06■■□□□ 1.6
SMNDC1-201ENST00000369592 R3HDMLQ9H3Y0 253 aa25.06■■□□□ 1.6
SMNDC1-201ENST00000369592 SIPA1L1O43166 1804 aa25.06■■□□□ 1.6
SMNDC1-201ENST00000369592 LRRCC1Q9C099 1032 aa25.05■■□□□ 1.6
SMNDC1-201ENST00000369592 OSBPL5Q9H0X9 879 aaPredicted RBP25.05■■□□□ 1.6
SMNDC1-201ENST00000369592 TBC1D12O60347 775 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 TBC1D8O95759 1140 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 ALDH1A1P00352 501 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 SLURP2P0DP57 97 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 PICALMQ13492 652 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 BRI3BPQ8WY22 251 aa25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 AATFQ9NY61 560 aaKnown RBP eCLIP25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.04■■□□□ 1.6
SMNDC1-201ENST00000369592 BAG3O95817 575 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 PLCG2P16885 1265 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 ATP5JP18859 108 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 PPIL2Q13356 520 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 TEX11Q8IYF3 940 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 OTUD5Q96G74 571 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 CRBNQ96SW2 442 aa25.03■■□□□ 1.6
SMNDC1-201ENST00000369592 PHIPQ8WWQ0 1821 aa25.02■■□□□ 1.6
SMNDC1-201ENST00000369592 SMARCA5O60264 1052 aaPredicted RBP25.02■■□□□ 1.6
SMNDC1-201ENST00000369592 IDH1O75874 414 aaKnown RBP25.02■■□□□ 1.6
SMNDC1-201ENST00000369592 CYP7A1P22680 504 aa25.02■■□□□ 1.6
SMNDC1-201ENST00000369592 PPATQ06203 517 aa25.02■■□□□ 1.6
SMNDC1-201ENST00000369592 IRF6O14896 467 aa25.01■■□□□ 1.59
SMNDC1-201ENST00000369592 GTF2A2P52657 109 aa25.01■■□□□ 1.59
SMNDC1-201ENST00000369592 METTL16Q86W50 562 aaKnown RBP25.01■■□□□ 1.59
SMNDC1-201ENST00000369592 KCNH4Q9UQ05 1017 aa25.01■■□□□ 1.59
SMNDC1-201ENST00000369592 DOCK1Q14185 1865 aa25■■□□□ 1.59
SMNDC1-201ENST00000369592 GPR25O00155 361 aa25■■□□□ 1.59
SMNDC1-201ENST00000369592 DYNLL1P63167 89 aaKnown RBP25■■□□□ 1.59
SMNDC1-201ENST00000369592 MAP3K12Q12852 859 aa25■■□□□ 1.59
SMNDC1-201ENST00000369592 TTF1Q15361 905 aaPredicted RBP25■■□□□ 1.59
SMNDC1-201ENST00000369592 ZSCAN29Q8IWY8 852 aaPredicted RBP25■■□□□ 1.59
SMNDC1-201ENST00000369592 MAGEB6Q8N7X4 407 aa25■■□□□ 1.59
SMNDC1-201ENST00000369592 FLT1P17948 1338 aa24.99■■□□□ 1.59
SMNDC1-201ENST00000369592 PRPF38BQ5VTL8 546 aaKnown RBP24.99■■□□□ 1.59
SMNDC1-201ENST00000369592 ZNF296Q8WUU4 475 aaPredicted RBP24.99■■□□□ 1.59
SMNDC1-201ENST00000369592 HAUS7Q99871 368 aa24.99■■□□□ 1.59
SMNDC1-201ENST00000369592 NOL10Q9BSC4 688 aaKnown RBP24.99■■□□□ 1.59
SMNDC1-201ENST00000369592 PTPRFP10586 1907 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 CCL15-CCL14A0A0B4J2E2 113 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 TCRBV5S4A2TA0A5A2 114 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 MOGSQ13724 837 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 CCL15Q16663 113 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 SCYL3Q8IZE3 742 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 TGFBRAP1Q8WUH2 860 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 EDC3Q96F86 508 aaKnown RBP24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 RIOK1Q9BRS2 568 aaKnown RBP24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 MYH1P12882 1939 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 MYH7P12883 1935 aa24.98■■□□□ 1.59
SMNDC1-201ENST00000369592 GOLIM4O00461 696 aa24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 CTNND1O60716 968 aaKnown RBP24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 PDE6AP16499 860 aa24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 CERS3Q8IU89 383 aa24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 DHX36Q9H2U1 1008 aaKnown RBP24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 BOLA2Q9H3K6 86 aa24.97■■□□□ 1.59
SMNDC1-201ENST00000369592 DDX60LQ5H9U9 1706 aaKnown RBP24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 CETPP11597 493 aa24.96■■□□□ 1.59
SMNDC1-201ENST00000369592 CRHR2Q13324 411 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms