RNA–Protein interactions for RNA: ENST00000369442.3

GDAP2-201, Transcript of ganglioside induced differentiation associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene GDAP2, Length 2,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP2-201ENST00000369442 BICD2Q8TD16 824 aa16.15■□□□□ 0.18
GDAP2-201ENST00000369442 KRT23Q9C075 422 aa16.15■□□□□ 0.18
GDAP2-201ENST00000369442 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
GDAP2-201ENST00000369442 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
GDAP2-201ENST00000369442 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 NMT2O60551 498 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 WTAPQ15007 396 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 RBM17Q96I25 401 aaKnown RBP16.14■□□□□ 0.17
GDAP2-201ENST00000369442 SCAND2PQ9GZW5 306 aaPredicted RBP16.14■□□□□ 0.17
GDAP2-201ENST00000369442 POLLQ9UGP5 575 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 SEMA3EO15041 775 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 NR1I2O75469 434 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 CKAP2LQ8IYA6 745 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 ALG1Q9BT22 464 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 SLC26A6Q9BXS9 759 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
GDAP2-201ENST00000369442 RIMBP2O15034 1052 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 DHX16O60231 1041 aaKnown RBP16.13■□□□□ 0.17
GDAP2-201ENST00000369442 USP17L8P0C7I0 530 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 FAM47AQ5JRC9 791 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
GDAP2-201ENST00000369442 LEMD3Q9Y2U8 911 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 KIF3AQ9Y496 699 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 NTRK3Q16288 839 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 CLIC4Q9Y696 253 aa16.13■□□□□ 0.17
GDAP2-201ENST00000369442 TNKSO95271 1327 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 C6orf229H3BNL8 230 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 LDHBP07195 334 aaKnown RBP16.12■□□□□ 0.17
GDAP2-201ENST00000369442 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 TDRD7Q8NHU6 1098 aaKnown RBP16.12■□□□□ 0.17
GDAP2-201ENST00000369442 SH3RF3Q8TEJ3 882 aaPredicted RBP16.12■□□□□ 0.17
GDAP2-201ENST00000369442 GGA1Q9UJY5 639 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 MYH2Q9UKX2 1941 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 ELP1O95163 1332 aa16.12■□□□□ 0.17
GDAP2-201ENST00000369442 PDIA4P13667 645 aaKnown RBP16.11■□□□□ 0.17
GDAP2-201ENST00000369442 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 GOLPH3LQ9H4A5 285 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 RRAGDQ9NQL2 400 aaPredicted RBP16.11■□□□□ 0.17
GDAP2-201ENST00000369442 LIFRP42702 1097 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 ZNF804AQ7Z570 1209 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 FBXW7Q969H0 707 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 AKT1S1Q96B36 256 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 CD209Q9NNX6 404 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
GDAP2-201ENST00000369442 IARSP41252 1262 aaKnown RBP16.1■□□□□ 0.17
GDAP2-201ENST00000369442 DYNLL2Q96FJ2 89 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 CRNKL1Q9BZJ0 848 aaKnown RBP16.1■□□□□ 0.17
GDAP2-201ENST00000369442 MCM9Q9NXL9 1143 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 ECM29Q5VYK3 1845 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 ERICH2A1L162 156 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 MMP10P09238 476 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 ZNF772Q68DY9 489 aaPredicted RBP16.1■□□□□ 0.17
GDAP2-201ENST00000369442 ZNF654Q8IZM8 581 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 ENAHQ8N8S7 591 aaPredicted RBP16.1■□□□□ 0.17
GDAP2-201ENST00000369442 TBC1D16Q8TBP0 767 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 RNF41Q9H4P4 317 aaPredicted RBP16.1■□□□□ 0.17
GDAP2-201ENST00000369442 DUOX1Q9NRD9 1551 aa16.1■□□□□ 0.17
GDAP2-201ENST00000369442 KIF23Q02241 960 aaPredicted RBP16.09■□□□□ 0.17
GDAP2-201ENST00000369442 RTN1Q16799 776 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 KRT40Q6A162 431 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 ESR2Q92731 530 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
GDAP2-201ENST00000369442 SAP30BPQ9UHR5 308 aaKnown RBP16.09■□□□□ 0.17
GDAP2-201ENST00000369442 ANAPC4Q9UJX5 808 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 CFAP45Q9UL16 551 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 A0A087WWV3 80 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
GDAP2-201ENST00000369442 SART3Q15020 963 aaKnown RBP16.09■□□□□ 0.17
GDAP2-201ENST00000369442 SEC23AQ15436 765 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 MPNDQ8N594 471 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 NUP62CLQ9H1M0 184 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 KCNJ14Q9UNX9 436 aa16.09■□□□□ 0.17
GDAP2-201ENST00000369442 USP5P45974 858 aa16.08■□□□□ 0.17
GDAP2-201ENST00000369442 ME1P48163 572 aa16.08■□□□□ 0.17
GDAP2-201ENST00000369442 TGFBRAP1Q8WUH2 860 aa16.08■□□□□ 0.17
GDAP2-201ENST00000369442 ERCC4Q92889 916 aaPredicted RBP16.08■□□□□ 0.17
GDAP2-201ENST00000369442 PDS5AQ29RF7 1337 aaKnown RBP16.08■□□□□ 0.16
GDAP2-201ENST00000369442 F8W031 263 aaPredicted RBP16.08■□□□□ 0.16
GDAP2-201ENST00000369442 RXRBP28702 533 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 SSRP1Q08945 709 aaKnown RBP16.08■□□□□ 0.16
GDAP2-201ENST00000369442 MAPKAPK5Q8IW41 473 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 CCAR1Q8IX12 1150 aaKnown RBP16.08■□□□□ 0.16
GDAP2-201ENST00000369442 SLC44A5Q8NCS7 719 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 WDR66Q8TBY9 1149 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
GDAP2-201ENST00000369442 FUCA2Q9BTY2 467 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.16
GDAP2-201ENST00000369442 ATP2B4P23634 1241 aa16.07■□□□□ 0.16
GDAP2-201ENST00000369442 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
GDAP2-201ENST00000369442 PIBF1Q8WXW3 757 aa16.07■□□□□ 0.16
GDAP2-201ENST00000369442 ZNF396Q96N95 335 aaPredicted RBP16.07■□□□□ 0.16
GDAP2-201ENST00000369442 RCOR1Q9UKL0 485 aa16.07■□□□□ 0.16
GDAP2-201ENST00000369442 CCDC88AQ3V6T2 1871 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms