RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
TPM3-210ENST00000368530 WRNIP1Q96S55 665 aa12.17□□□□□ -0.46
TPM3-210ENST00000368530 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
TPM3-210ENST00000368530 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
TPM3-210ENST00000368530 INPP5BP32019 993 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 LACTBP83111 547 aaPredicted RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 PPIL2Q13356 520 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 MOGSQ13724 837 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 C17orf99Q6UX52 265 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 EYA2O00167 538 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 PITPNM1O00562 1244 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 SRGAP3O43295 1099 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 SNAPC2Q13487 334 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 PUM3Q15397 648 aaKnown RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 SLC9C1Q4G0N8 1177 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 MIGA2Q7L4E1 593 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
TPM3-210ENST00000368530 FAM151AQ8WW52 585 aa12.16□□□□□ -0.46
TPM3-210ENST00000368530 ADGRA2Q96PE1 1338 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 SEC24BO95487 1268 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 PPATQ06203 517 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 NFIAQ12857 509 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 SH3TC2Q8TF17 1288 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 FAM198AQ9UFP1 575 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 DAGLAQ9Y4D2 1042 aa12.15□□□□□ -0.46
TPM3-210ENST00000368530 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 MAST3O60307 1309 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
TPM3-210ENST00000368530 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 ZFPM1Q8IX07 1006 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 WDR66Q8TBY9 1149 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 LPIN2Q92539 896 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 ZNF341Q9BYN7 854 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 TMOD2Q9NZR1 351 aa12.14□□□□□ -0.47
TPM3-210ENST00000368530 SURF6O75683 361 aaKnown RBP12.13□□□□□ -0.47
TPM3-210ENST00000368530 GNRH1P01148 92 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 PRDX5P30044 214 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 FXR1P51114 621 aaKnown RBP eCLIP12.13□□□□□ -0.47
TPM3-210ENST00000368530 DCAF15Q66K64 600 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 TRIM47Q96LD4 638 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 ATRNL1Q5VV63 1379 aa12.13□□□□□ -0.47
TPM3-210ENST00000368530 PRMT2P55345 433 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 NOL9Q5SY16 702 aaKnown RBP12.12□□□□□ -0.47
TPM3-210ENST00000368530 GPAT2Q6NUI2 795 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 LRRCC1Q9C099 1032 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
TPM3-210ENST00000368530 SALL1Q9NSC2 1324 aa12.12□□□□□ -0.47
TPM3-210ENST00000368530 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 PDHXO00330 501 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
TPM3-210ENST00000368530 SLC5A1P13866 664 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 MAP3K10Q02779 954 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 TCP10Q12799 353 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 MTFR1Q15390 333 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 SRRDQ9UH36 339 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 WDHD1O75717 1129 aaPredicted RBP12.11□□□□□ -0.47
TPM3-210ENST00000368530 CIAO1O76071 339 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 OSBPP22059 807 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 PSMC4P43686 418 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 OS9Q13438 667 aaPredicted RBP12.11□□□□□ -0.47
TPM3-210ENST00000368530 KIF22Q14807 665 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 BMP2KLQ5H9B9 411 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 SH3BP5LQ7L8J4 393 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 UBE2Q1Q7Z7E8 422 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 IL1RAPL2Q9NP60 686 aa12.11□□□□□ -0.47
TPM3-210ENST00000368530 CXCL11O14625 94 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
TPM3-210ENST00000368530 BCRP11274 1271 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 PHKA1P46020 1223 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 ATP2B3Q16720 1220 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 TTC22Q5TAA0 569 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 USP40Q9NVE5 1235 aa12.1□□□□□ -0.47
TPM3-210ENST00000368530 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
TPM3-210ENST00000368530 H0YGN5 161 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 LDHBP07195 334 aaKnown RBP12.09□□□□□ -0.47
TPM3-210ENST00000368530 SLURP2P0DP57 97 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
TPM3-210ENST00000368530 MFAP1P55081 439 aaKnown RBP12.09□□□□□ -0.47
TPM3-210ENST00000368530 MTX1Q13505 466 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 IDI2Q9BXS1 227 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 SIL1Q9H173 461 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 CEP126Q9P2H0 1117 aa12.09□□□□□ -0.47
TPM3-210ENST00000368530 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms