RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 SH3TC2Q8TF17 1288 aa16.75■□□□□ 0.27
PMF1-202ENST00000368277 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
PMF1-202ENST00000368277 MROH7-TTC4A0A0A0MT08 1334 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 PDHXO00330 501 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 WDHD1O75717 1129 aaPredicted RBP16.74■□□□□ 0.27
PMF1-202ENST00000368277 LACTBP83111 547 aaPredicted RBP16.74■□□□□ 0.27
PMF1-202ENST00000368277 MECOMQ03112 1051 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 NOL9Q5SY16 702 aaKnown RBP16.74■□□□□ 0.27
PMF1-202ENST00000368277 ZNF333Q96JL9 665 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 HMG20BQ9P0W2 317 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 KCNH4Q9UQ05 1017 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 HDAC5Q9UQL6 1122 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
PMF1-202ENST00000368277 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 GNAI2P04899 355 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
PMF1-202ENST00000368277 SLC9C1Q4G0N8 1177 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 ZGPATQ8N5A5 531 aaKnown RBP16.73■□□□□ 0.27
PMF1-202ENST00000368277 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
PMF1-202ENST00000368277 MYH1P12882 1939 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 CYP2C8P10632 490 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 RHBDL3P58872 404 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 ANKRD23Q86SG2 305 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 AKAP2Q9Y2D5 859 aa16.72■□□□□ 0.27
PMF1-202ENST00000368277 PDS5AQ29RF7 1337 aaKnown RBP16.71■□□□□ 0.27
PMF1-202ENST00000368277 IPO8O15397 1037 aaKnown RBP16.71■□□□□ 0.27
PMF1-202ENST00000368277 ENTPD3O75355 529 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 MCAMP43121 646 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 SPATA5Q8NB90 893 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.27
PMF1-202ENST00000368277 SNRKQ9NRH2 765 aa16.71■□□□□ 0.27
PMF1-202ENST00000368277 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
PMF1-202ENST00000368277 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
PMF1-202ENST00000368277 KIF22Q14807 665 aa16.7■□□□□ 0.26
PMF1-202ENST00000368277 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
PMF1-202ENST00000368277 TRIM47Q96LD4 638 aa16.7■□□□□ 0.26
PMF1-202ENST00000368277 RAI14Q9P0K7 980 aa16.7■□□□□ 0.26
PMF1-202ENST00000368277 ZHX2Q9Y6X8 837 aa16.7■□□□□ 0.26
PMF1-202ENST00000368277 GPR75-ASB3A0A0A6YYF3 556 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 PTPRAP18433 802 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 OSBPP22059 807 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 ARID4AP29374 1257 aaPredicted RBP16.69■□□□□ 0.26
PMF1-202ENST00000368277 PSMC4P43686 418 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 ZKSCAN2Q63HK3 967 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 SPTY2D1Q68D10 685 aaPredicted RBP16.69■□□□□ 0.26
PMF1-202ENST00000368277 MIER1Q8N108 512 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
PMF1-202ENST00000368277 DBNDD2Q9BQY9 259 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 TMEM106CQ9BVX2 250 aa16.69■□□□□ 0.26
PMF1-202ENST00000368277 ZBTB22O15209 634 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 RLBP1P12271 317 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 MTFR1Q15390 333 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 SLF2Q8IX21 1173 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 FAM163AQ96GL9 167 aaPredicted RBP16.68■□□□□ 0.26
PMF1-202ENST00000368277 PICK1Q9NRD5 415 aa16.68■□□□□ 0.26
PMF1-202ENST00000368277 A0A0G2JLL6 359 aaPredicted RBP16.67■□□□□ 0.26
PMF1-202ENST00000368277 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
PMF1-202ENST00000368277 FMNL1O95466 1100 aaPredicted RBP16.67■□□□□ 0.26
PMF1-202ENST00000368277 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
PMF1-202ENST00000368277 PRRT2Q7Z6L0 340 aaPredicted RBP16.67■□□□□ 0.26
PMF1-202ENST00000368277 SH3RF3Q8TEJ3 882 aaPredicted RBP16.67■□□□□ 0.26
PMF1-202ENST00000368277 AFG3L2Q9Y4W6 797 aa16.67■□□□□ 0.26
PMF1-202ENST00000368277 MYPNQ86TC9 1320 aa16.67■□□□□ 0.26
PMF1-202ENST00000368277 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 CXCL11O14625 94 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 BCRP11274 1271 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 OS9Q13438 667 aaPredicted RBP16.66■□□□□ 0.26
PMF1-202ENST00000368277 POLA2Q14181 598 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 TNNI3KQ59H18 835 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 NBPF11Q86T75 865 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 TEX11Q8IYF3 940 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 PARK7Q99497 189 aaKnown RBP16.66■□□□□ 0.26
PMF1-202ENST00000368277 TLR7Q9NYK1 1049 aaKnown RBP16.66■□□□□ 0.26
PMF1-202ENST00000368277 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 GABRQQ9UN88 632 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 FPGT-TNNI3KV9GXZ4 949 aa16.66■□□□□ 0.26
PMF1-202ENST00000368277 CEP290O15078 2479 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 NAV1Q8NEY1 1877 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 ALPK3Q96L96 1907 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 MAP3K10Q02779 954 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 PRKCZQ05513 592 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 TTC39AQ5SRH9 613 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 ITPRIPQ8IWB1 547 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
PMF1-202ENST00000368277 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.65■□□□□ 0.26
PMF1-202ENST00000368277 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
PMF1-202ENST00000368277 LRP2BPQ9P2M1 347 aa16.65■□□□□ 0.26
PMF1-202ENST00000368277 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
PMF1-202ENST00000368277 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms