RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
YBX3-204ENST00000366290 C8orf37Q96NL8 207 aa11□□□□□ -0.65
YBX3-204ENST00000366290 OXCT2Q9BYC2 517 aaPredicted RBP11□□□□□ -0.65
YBX3-204ENST00000366290 NPHP3Q7Z494 1330 aa11□□□□□ -0.65
YBX3-204ENST00000366290 RGS12O14924 1447 aa11□□□□□ -0.65
YBX3-204ENST00000366290 SIN3BO75182 1162 aa10.99□□□□□ -0.65
YBX3-204ENST00000366290 NSUN5Q96P11 429 aaKnown RBP10.99□□□□□ -0.65
YBX3-204ENST00000366290 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
YBX3-204ENST00000366290 LATS2Q9NRM7 1088 aa10.99□□□□□ -0.65
YBX3-204ENST00000366290 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
YBX3-204ENST00000366290 POGKQ9P215 609 aa10.99□□□□□ -0.65
YBX3-204ENST00000366290 TRAK1Q9UPV9 953 aa10.99□□□□□ -0.65
YBX3-204ENST00000366290 GADD45BO75293 160 aaPredicted RBP10.98□□□□□ -0.65
YBX3-204ENST00000366290 RECKO95980 971 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
YBX3-204ENST00000366290 GPLD1P80108 840 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 C1orf229Q6ZS94 237 aaPredicted RBP10.98□□□□□ -0.65
YBX3-204ENST00000366290 NCAPG2Q86XI2 1143 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 TRPM4Q8TD43 1214 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
YBX3-204ENST00000366290 IGFLR1Q9H665 355 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 VTI1BQ9UEU0 232 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 AK5Q9Y6K8 562 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
YBX3-204ENST00000366290 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
YBX3-204ENST00000366290 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
YBX3-204ENST00000366290 OIP5O43482 229 aa10.97□□□□□ -0.65
YBX3-204ENST00000366290 ARAFP10398 606 aa10.97□□□□□ -0.65
YBX3-204ENST00000366290 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
YBX3-204ENST00000366290 TSNAXIP1Q2TAA8 658 aa10.97□□□□□ -0.65
YBX3-204ENST00000366290 PEAR1Q5VY43 1037 aaPredicted RBP10.97□□□□□ -0.65
YBX3-204ENST00000366290 DNAJB12Q9NXW2 375 aaKnown RBP10.97□□□□□ -0.65
YBX3-204ENST00000366290 TULP4Q9NRJ4 1543 aa10.97□□□□□ -0.65
YBX3-204ENST00000366290 A0A1W2PP55 124 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 GIPC1O14908 333 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 KIAA0319Q5VV43 1072 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 OSBPL7Q9BZF2 842 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 SUV39H2Q9H5I1 410 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 KLF15Q9UIH9 416 aa10.96□□□□□ -0.65
YBX3-204ENST00000366290 EP400Q96L91 3159 aa10.96□□□□□ -0.66
YBX3-204ENST00000366290 LOC102724428A0A0B4J2F2 783 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
YBX3-204ENST00000366290 EIF4BP23588 611 aaKnown RBP10.95□□□□□ -0.66
YBX3-204ENST00000366290 ADH6P28332 368 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 SIK1P57059 783 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
YBX3-204ENST00000366290 PCSK7Q16549 785 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 TNFRSF25Q93038 417 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 BCO2Q9BYV7 579 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 BACH2Q9BYV9 841 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 C12orf49Q9H741 205 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 ENAMQ9NRM1 1142 aa10.95□□□□□ -0.66
YBX3-204ENST00000366290 GPRASP1Q5JY77 1395 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 SHISA8B8ZZ34 492 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 ACPPP15309 386 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 GRM2Q14416 872 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 NXPE4Q6UWF7 544 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 HFE2Q6ZVN8 426 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 CEP120Q8N960 986 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 SPACA7Q96KW9 195 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 EHD4Q9H223 541 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 GDF2Q9UK05 429 aaPredicted RBP10.94□□□□□ -0.66
YBX3-204ENST00000366290 ITSN1Q15811 1721 aa10.94□□□□□ -0.66
YBX3-204ENST00000366290 ATP7BP35670 1465 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 SPATA31A3Q5VYP0 1347 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 J3QW42 95 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 OSMRQ99650 979 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 ZKSCAN3Q9BRR0 538 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
YBX3-204ENST00000366290 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
YBX3-204ENST00000366290 ATRNO75882 1429 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
YBX3-204ENST00000366290 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 TONSLQ96HA7 1378 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 NEURL1BA8MQ27 555 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 RASSF7Q02833 373 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 LDLRAD1Q5T700 205 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 SLCO4C1Q6ZQN7 724 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 FCHSD1Q86WN1 690 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 GOLGA6L1Q8N7Z2 621 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 SRCIN1Q9C0H9 1055 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 IGSF5Q9NSI5 407 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 DZANK1Q9NVP4 752 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 GGA1Q9UJY5 639 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 USP21Q9UK80 565 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 SLC6A14Q9UN76 642 aa10.92□□□□□ -0.66
YBX3-204ENST00000366290 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
YBX3-204ENST00000366290 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
YBX3-204ENST00000366290 TRPA1O75762 1119 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 GHRHP01286 108 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 ADH7P40394 386 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 NBPF8Q3BBV2 869 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 KRT28Q7Z3Y7 464 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 GLIS3Q8NEA6 775 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 NEDD1Q8NHV4 660 aa10.91□□□□□ -0.66
YBX3-204ENST00000366290 SCARF2Q96GP6 870 aaPredicted RBP10.91□□□□□ -0.66
YBX3-204ENST00000366290 CRELD1Q96HD1 420 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms