RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 U3KQE9 123 aa1.26□□□□□ -2.21
RNU6-54P-201ENST00000365563 MYOCOSA0A1B0GUC4 107 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 SOX1O00570 391 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 PRICKLE3O43900 615 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 HPXP02790 462 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 AMHP03971 560 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF20P17024 532 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 PDE6BP35913 854 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 KCNC1P48547 511 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 KRTAP10-6P60371 365 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 VAC14Q08AM6 782 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 POU4F3Q15319 338 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 TRIP4Q15650 581 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 OLFML2BQ68BL8 750 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 HGSNATQ68CP4 663 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 SMYD4Q8IYR2 804 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 TOP6BLQ8N6T0 577 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 TMEM102Q8N9M5 508 aaPredicted RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 LINC01356Q8N9X3 169 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 VWCEQ96DN2 955 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 FOXQ1Q9C009 403 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 VPS11Q9H270 941 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 QTRT2Q9H974 415 aaKnown RBP1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 ADAMTS20P59510 1910 aa1.25□□□□□ -2.21
RNU6-54P-201ENST00000365563 FAM155AB1AL88 458 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 HRKO00198 91 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 FOXO3O43524 673 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 LEFTY1O75610 366 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 ITGB3P05106 788 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 ESRRAP11474 423 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 ITGB6P18564 788 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 MAOBP27338 520 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 SEC13P55735 322 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 PDE3AQ14432 1141 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 LCE1EQ5T753 118 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 CNKSR3Q6P9H4 555 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 VN1R5Q7Z5H4 357 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 THAP5Q7Z6K1 395 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 Q8N1X5 172 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 OXR1Q8N573 874 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 CHST13Q8NET6 341 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 PIWIL2Q8TC59 973 aaKnown RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 SH3RF3Q8TEJ3 882 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 DVL3Q92997 716 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 KISS1RQ969F8 398 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 INTS4Q96HW7 963 aaKnown RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 LOXL4Q96JB6 756 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 SAMD11Q96NU1 681 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 RNF32Q9H0A6 362 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF552Q9H707 407 aaPredicted RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 GCM1Q9NP62 436 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 SSU72Q9NP77 194 aaKnown RBP1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 DZANK1Q9NVP4 752 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 TMEM59LQ9UK28 342 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 PCOLCE2Q9UKZ9 415 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 TBC1D2BQ9UPU7 963 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 KIAA1024Q9UPX6 916 aa1.24□□□□□ -2.21
RNU6-54P-201ENST00000365563 FITM1A5D6W6 292 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 OR14I1A6ND48 311 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 A6NJR5 290 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PIK3CDO00329 1044 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZBTB7BO15156 539 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 RNGTTO60942 597 aaKnown RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 SLFN14P0C7P3 912 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 CLDN10P78369 228 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ID3Q02535 119 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 NKPD1Q17RQ9 610 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 AMER1Q5JTC6 1135 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PDE12Q6L8Q7 609 aaKnown RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PLEKHM2Q8IWE5 1019 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 OGFOD1Q8N543 542 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ASAP3Q8TDY4 903 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PPP1R13LQ8WUF5 828 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PMEPA1Q969W9 287 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 SYTL4Q96C24 671 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF594Q96JF6 807 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 C8orf49Q96NF6 230 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 HHIPQ96QV1 700 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 CDK5RAP1Q96SZ6 601 aaKnown RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 HINFPQ9BQA5 517 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 SGPP1Q9BX95 441 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 FAM117AQ9C073 453 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 NRSN2Q9GZP1 204 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ATP13A1Q9HD20 1204 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 PRDM5Q9NQX1 630 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 SIRT5Q9NXA8 310 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 KANSL3Q9P2N6 904 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 ZNF777Q9ULD5 760 aaPredicted RBP1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 MAPK8IP1Q9UQF2 711 aa1.23□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP17L3A6NCW0 530 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 USP17L4A6NCW7 530 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 NFKBIEO00221 500 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 N4BP3O15049 544 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 TMPRSS2O15393 492 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 ERBB2P04626 1255 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 CYP2E1P05181 493 aaPredicted RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 RPLP1P05386 114 aaKnown RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 CES1P23141 567 aa1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 BRD2P25440 801 aaKnown RBP1.22□□□□□ -2.21
RNU6-54P-201ENST00000365563 HK2P52789 917 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms