RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 PALM3A6NDB9 673 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-202ENST00000361332 CETN3O15182 167 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 SPAG1Q07617 926 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ZYXQ15942 572 aaKnown RBP9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 RBM46Q8TBY0 533 aaKnown RBP9.29□□□□□ -0.92
CTNND1-202ENST00000361332 RRP36Q96EU6 259 aaKnown RBP9.29□□□□□ -0.92
CTNND1-202ENST00000361332 NLRP3Q96P20 1036 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ORC3Q9UBD5 711 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ARHGEF11O15085 1522 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 BSPRYQ5W0U4 402 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ZNF449Q6P9G9 518 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 ATP2A3Q93084 1043 aa9.29□□□□□ -0.92
CTNND1-202ENST00000361332 CCDC141Q6ZP82 1450 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 A6NNZ2 444 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 TUBB8Q3ZCM7 444 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 SEL1L2Q5TEA6 688 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 MORC4Q8TE76 937 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 OLA1Q9NTK5 396 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 RTEL1-TNFRSF6BF6WH68 1400 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 PPFIA2O75334 1257 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 PEX19P40855 299 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 IL1RL1Q01638 556 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 KRT33BQ14525 404 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ARHGEF6Q15052 776 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ELF2Q15723 593 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ZSCAN26Q16670 478 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 CABS1Q96KC9 395 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 CCDC42Q96M95 316 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 SH2D4AQ9H788 454 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ABCF3Q9NUQ8 709 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 NKIRAS1Q9NYS0 192 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 MTRF1LQ9UGC7 380 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ATAD2Q6PL18 1390 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 DNM2P50570 870 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 CALCOCO2Q13137 446 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 KRT79Q5XKE5 535 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 MRPS27Q92552 414 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 KIFAP3Q92845 792 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 BAIAP2L1Q9UHR4 511 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 C1orf228Q6PIY5 440 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ARHGEF2Q92974 986 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 TEX13AQ9BXU3 409 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 SLC5A4Q9NY91 659 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 MARCKSP29966 332 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
CTNND1-202ENST00000361332 TRIM56Q9BRZ2 755 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 NSFL1CQ9UNZ2 370 aaKnown RBP9.28□□□□□ -0.92
CTNND1-202ENST00000361332 ZNF365Q70YC5 407 aa9.27□□□□□ -0.92
CTNND1-202ENST00000361332 GBP5Q96PP8 586 aa9.27□□□□□ -0.92
CTNND1-202ENST00000361332 IFNKQ9P0W0 207 aa9.27□□□□□ -0.92
CTNND1-202ENST00000361332 MTUS1Q9ULD2 1270 aa9.27□□□□□ -0.92
CTNND1-202ENST00000361332 IQGAP2Q13576 1575 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 GIGYF1O75420 1035 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 OAS2P29728 719 aaKnown RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 SMTNP53814 917 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 CERS3Q8IU89 383 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 PRPF6O94906 941 aaKnown RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 TNNC1P63316 161 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 DNM1Q05193 864 aaKnown RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 KCNG4Q8TDN1 519 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 ANKRD24Q8TF21 1146 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 SLC7A5P2Q9GIP4 190 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 SYNDIG1Q9H7V2 258 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 BAG5Q9UL15 447 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 CALML3P27482 149 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 BLVRAP53004 296 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 NECAB1Q8N987 351 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 NCOA7Q8NI08 942 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 KIAA0586Q9BVV6 1533 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 HGSO14964 777 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 KRT3P12035 628 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 WDR48Q8TAF3 677 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 HVCN1Q96D96 273 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 CSRNP2Q9H175 543 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 TSPYL2Q9H2G4 693 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-202ENST00000361332 MOSPD1Q9UJG1 213 aa9.27□□□□□ -0.93
CTNND1-202ENST00000361332 SNAPC4Q5SXM2 1469 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 POGZQ7Z3K3 1410 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 TXNDC9O14530 226 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 FYB2Q5VWT5 728 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 PHLDB2Q86SQ0 1253 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 PALM2Q8IXS6 379 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 GPR161Q8N6U8 529 aaKnown RBP9.26□□□□□ -0.93
CTNND1-202ENST00000361332 MCUR1Q96AQ8 359 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 PARD3Q8TEW0 1356 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 DDX39AO00148 427 aaKnown RBP9.26□□□□□ -0.93
CTNND1-202ENST00000361332 MAFGO15525 162 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 OCM2P0CE71 109 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 OCMP0CE72 109 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-202ENST00000361332 TAF7Q15545 349 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-202ENST00000361332 TACO1Q9BSH4 297 aaKnown RBP9.26□□□□□ -0.93
CTNND1-202ENST00000361332 FAM8A1Q9UBU6 413 aa9.26□□□□□ -0.93
CTNND1-202ENST00000361332 JAG2Q9Y219 1238 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms