RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 EFCC1Q9HA90 598 aa9.14□□□□□ -0.95
CCL28-201ENST00000361115 SRCAPQ6ZRS2 3230 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 CTIFO43310 598 aaKnown RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 HCLS1P14317 486 aaPredicted RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 IL1R1P14778 569 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 KIAA1524Q8TCG1 905 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 U3KPZ7 1027 aaPredicted RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 COL2A1P02458 1487 aaPredicted RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 SPEF2Q9C093 1822 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 AP5Z1O43299 807 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 IGHMBP2P38935 993 aaKnown RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 FXR1P51114 621 aaKnown RBP eCLIP9.13□□□□□ -0.95
CCL28-201ENST00000361115 HDGFL1Q5TGJ6 251 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 ZNF804AQ7Z570 1209 aa9.13□□□□□ -0.95
CCL28-201ENST00000361115 SYAP1Q96A49 352 aaPredicted RBP9.13□□□□□ -0.95
CCL28-201ENST00000361115 ZNF853P0CG23 659 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 CTSWP56202 376 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 NEXNQ0ZGT2 675 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 CCDC30Q5VVM6 783 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 TAF3Q5VWG9 929 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
CCL28-201ENST00000361115 TRMT44Q8IYL2 757 aaKnown RBP9.12□□□□□ -0.95
CCL28-201ENST00000361115 ANKIB1Q9P2G1 1089 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
CCL28-201ENST00000361115 CETPP11597 493 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 NEK4P51957 841 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
CCL28-201ENST00000361115 TSPYL6Q8N831 410 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 TBC1D22AQ8WUA7 517 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 OGFRQ9NZT2 677 aa9.12□□□□□ -0.95
CCL28-201ENST00000361115 SLFN14P0C7P3 912 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 FAM109BQ6ICB4 259 aaPredicted RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 ANKRD23Q86SG2 305 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 FAM184AQ8NB25 1140 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 CELF1Q92879 486 aaKnown RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 FEZ1Q99689 392 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 DBNDD1Q9H9R9 158 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 DIAPH3Q9NSV4 1193 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 UBXN2AP68543 259 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 MKRN3Q13064 507 aaKnown RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 SLAIN1Q8ND83 568 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 CTNNA3Q9UI47 895 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 ELL2O00472 640 aaPredicted RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 KDM4AO75164 1064 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 VAMP4O75379 141 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 GRM1Q13255 1194 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 DLGAP5Q15398 846 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 NOL9Q5SY16 702 aaKnown RBP9.11□□□□□ -0.95
CCL28-201ENST00000361115 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 RGS22Q8NE09 1264 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 PRO3102Q9H379 93 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 DCTPP1Q9H773 170 aa9.11□□□□□ -0.95
CCL28-201ENST00000361115 ADGRA2Q96PE1 1338 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 WNT10BO00744 389 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 PPIL2Q13356 520 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 TRIM17Q9Y577 477 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 CHAF1AQ13111 956 aaPredicted RBP9.1□□□□□ -0.95
CCL28-201ENST00000361115 IRF5Q13568 498 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 SPC24Q8NBT2 197 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 THUMPD2Q9BTF0 503 aaKnown RBP9.1□□□□□ -0.95
CCL28-201ENST00000361115 GINM1Q9NU53 330 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 MGAMO43451 1857 aa9.1□□□□□ -0.95
CCL28-201ENST00000361115 KCNJ4P48050 445 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 CUL4AQ13619 759 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 IRS2Q9Y4H2 1338 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 CSF1RP07333 972 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 GABPB1Q06547 395 aaPredicted RBP9.09□□□□□ -0.95
CCL28-201ENST00000361115 TTLL12Q14166 644 aaPredicted RBP9.09□□□□□ -0.95
CCL28-201ENST00000361115 CCDC183Q5T5S1 534 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 KSR2Q6VAB6 950 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 PXYLP1Q8TE99 480 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 GTF3C2Q8WUA4 911 aaPredicted RBP9.09□□□□□ -0.95
CCL28-201ENST00000361115 ARHGAP45Q92619 1136 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 SPDYE5A6NIY4 337 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 ERC2O15083 957 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 REC8O95072 547 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 UBE2Q1Q7Z7E8 422 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 OTUD5Q96G74 571 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 PALD1Q9ULE6 856 aa9.09□□□□□ -0.95
CCL28-201ENST00000361115 H7C1W4 665 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 PTPN12Q05209 780 aaKnown RBP9.08□□□□□ -0.96
CCL28-201ENST00000361115 PPATQ06203 517 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 ZIC5Q96T25 663 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 DDX41Q9UJV9 622 aaKnown RBP9.08□□□□□ -0.96
CCL28-201ENST00000361115 LOC285556D6RIA3 1793 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 MX1P20591 662 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 CASC1Q6TDU7 716 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 MINPP1Q9UNW1 487 aa9.08□□□□□ -0.96
CCL28-201ENST00000361115 CNPY2Q9Y2B0 182 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms