RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 NEK11Q8NG66 645 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 VAV2P52735 878 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 NAPAP54920 295 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-202ENST00000359526 NLGN1Q8N2Q7 840 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 SCLT1Q96NL6 688 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 HOMER2Q9NSB8 354 aa13.77□□□□□ -0.21
DNMT1-202ENST00000359526 METP08581 1390 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.216e-7■■■□□ 16.6
DNMT1-202ENST00000359526 TFCP2Q12800 502 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 CC2D2BQ6DHV5 1058 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 MMRN2Q9H8L6 949 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 GTF3C6Q969F1 213 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 TMEM87BQ96K49 555 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 A6NNZ2 444 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 KIF4AO95239 1232 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 GNA11P29992 359 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 TUBB8Q3ZCM7 444 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 CEP57Q86XR8 500 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 PHKG2P15735 406 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 KRBA2Q6ZNG9 492 aa13.76□□□□□ -0.21
DNMT1-202ENST00000359526 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 TNNC1P63316 161 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 OTUD6BQ8N6M0 293 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
DNMT1-202ENST00000359526 EYA2O00167 538 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 SNX14Q9Y5W7 946 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 SLC27A2O14975 620 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 HSP90AA4PQ58FG1 418 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 RRP36Q96EU6 259 aaKnown RBP13.75□□□□□ -0.21
DNMT1-202ENST00000359526 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 KDRP35968 1356 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 SGSM2O43147 1006 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 DTHD1Q6ZMT9 781 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 CNKSR1Q969H4 720 aa13.75□□□□□ -0.21
DNMT1-202ENST00000359526 NEURL4Q96JN8 1562 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 PHACTR2O75167 634 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 RXRBP28702 533 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 CCDC121Q6ZUS5 278 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 SREK1Q8WXA9 508 aaKnown RBP13.74□□□□□ -0.21
DNMT1-202ENST00000359526 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 LZTS2Q9BRK4 669 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 GUCA1BQ9UMX6 200 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 SEMA3EO15041 775 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 ZNF75DP51815 510 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 LZTFL1Q9NQ48 299 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 ARHGEF25Q86VW2 580 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
DNMT1-202ENST00000359526 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 OVOS2A0A0G2JMS6 1433 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 OVOS2A0A0J9YW53 1432 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 TNS3Q68CZ2 1445 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 OVOS2Q6IE36 1432 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 SSH2Q76I76 1423 aa13.74□□□□□ -0.21
DNMT1-202ENST00000359526 PLCD1P51178 756 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
DNMT1-202ENST00000359526 ANO1Q5XXA6 986 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 TSNARE1Q96NA8 513 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 ATP2B4P23634 1241 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 FAM76AQ8TAV0 307 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 SAMM50Q9Y512 469 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 SPATA31A6Q5VVP1 1343 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 EVCP57679 992 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 PPP2R3AQ06190 1150 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
DNMT1-202ENST00000359526 TM6SF1Q9BZW5 370 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
DNMT1-202ENST00000359526 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
DNMT1-202ENST00000359526 CUTAO60888 179 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 UNC5CLQ8IV45 518 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 LPIN2Q92539 896 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 LMBRD1Q9NUN5 540 aa13.73□□□□□ -0.21
DNMT1-202ENST00000359526 DEXIO95424 95 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 MLKLQ8NB16 471 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 FBF1Q8TES7 1133 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 MTRF1LQ9UGC7 380 aaKnown RBP13.72□□□□□ -0.21
DNMT1-202ENST00000359526 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 A0A1B0GVL5 298 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 VWA3BQ502W6 1294 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 NAPGQ99747 312 aaPredicted RBP13.72□□□□□ -0.21
DNMT1-202ENST00000359526 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
DNMT1-202ENST00000359526 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
DNMT1-202ENST00000359526 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
DNMT1-202ENST00000359526 CYP26C1Q6V0L0 522 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 TRIM35Q9UPQ4 493 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 PCP11498 1178 aaKnown RBP13.71□□□□□ -0.21
DNMT1-202ENST00000359526 STX17P56962 302 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 CCDC122Q5T0U0 273 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 BICD1Q96G01 975 aa13.71□□□□□ -0.21
DNMT1-202ENST00000359526 IQCGQ9H095 443 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms