RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MYD88Q99836 296 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 CPDO75976 1380 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 TNS3Q68CZ2 1445 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 N4BP1O75113 896 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 CCDC175P0C221 793 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 FECHP22830 423 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 FOXR1Q6PIV2 292 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 APTXQ7Z2E3 356 aaKnown RBP13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 DESI2Q9BSY9 194 aa13.86□□□□□ -0.19
SMARCAL1-201ENST00000357276 LAMB4A4D0S4 1761 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 KLF18A0A0U1RQI7 1052 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 A0A1B0GTH6 734 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 ABCB6Q9NP58 842 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 MTF1Q14872 753 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 CCDC102BQ68D86 513 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 PACS2Q86VP3 889 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 FAM71BQ8TC56 605 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 XAGE3Q8WTP9 111 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 NAA15Q9BXJ9 866 aaKnown RBP13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 TEX13AQ9BXU3 409 aaPredicted RBP13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 TJP1Q07157 1748 aa13.85□□□□□ -0.19
SMARCAL1-201ENST00000357276 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 GOLGA8BA8MQT2 603 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 EIF3JO75822 258 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 CPP00450 1065 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 PBX1P40424 430 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 CORO7P57737 925 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 C1orf141Q5JVX7 400 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 LRRC59Q96AG4 307 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 GEMIN8Q9NWZ8 242 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 RAI14Q9P0K7 980 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MAN1B1Q9UKM7 699 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MYH7P12883 1935 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 ABCA3Q99758 1704 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 PRC1O43663 620 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MORC3Q14149 939 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 KARSQ15046 597 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 LRRC31Q6UY01 552 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 RAD9BQ6WBX8 426 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 RASGRP2Q7LDG7 609 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 BRMS1Q9HCU9 246 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 KCNH3Q9ULD8 1083 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 ERLIN1O75477 346 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MCM6Q14566 821 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 COPS6Q7L5N1 327 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 MLKLQ8NB16 471 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 OSBP2Q969R2 916 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
SMARCAL1-201ENST00000357276 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 EIF3CLB5ME19 914 aaKnown RBP13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 TUBBP07437 444 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 SPATA20Q8TB22 786 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 CLIC6Q96NY7 704 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 EIF3CQ99613 913 aaKnown RBP13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 CASP8Q14790 479 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 PDILTQ8N807 584 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 SUGCTQ9HAC7 445 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 GLI3P10071 1580 aa13.83□□□□□ -0.2
SMARCAL1-201ENST00000357276 A0A0U1RQJ8 604 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 FOXN1O15353 648 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 AARSP49588 968 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 VSNL1P62760 191 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 WDR93Q6P2C0 686 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 TRIML1Q8N9V2 468 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 CNNM3Q8NE01 707 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZMYM6O95789 1325 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 FOXO4P98177 505 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZNF335Q9H4Z2 1342 aaPredicted RBP13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 KRT40Q6A162 431 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
SMARCAL1-201ENST00000357276 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 PUF60Q9UHX1 559 aaKnown RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 CPLX1O14810 134 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 FGAP02671 866 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 TTC31Q49AM3 519 aaPredicted RBP13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 ZSWIM4Q9H7M6 989 aa13.81□□□□□ -0.2
SMARCAL1-201ENST00000357276 KDM6AO15550 1401 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms