RNA–Protein interactions for RNA: ENST00000357154.7

SPOCK3-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPOCK3, Length 2,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-201ENST00000357154 FGAP02671 866 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 DACH1Q9UI36 760 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 ANTXR2P58335 489 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 METTL16Q86W50 562 aaKnown RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 TC2NQ8N9U0 490 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 FEZ2Q9UHY8 353 aaPredicted RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 ZMYM6O95789 1325 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 POTEB2H3BUK9 544 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 FOXP2O15409 715 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 ST5P78524 1137 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 FNBP4Q8N3X1 1017 aaPredicted RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 NEK11Q8NG66 645 aa17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
SPOCK3-201ENST00000357154 MAP2K7O14733 419 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 MLKLQ8NB16 471 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 GOLGA5Q8TBA6 731 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 KCNH3Q9ULD8 1083 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 PCDHA5Q9Y5H7 936 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 ATRNO75882 1429 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 ZNF18P17022 549 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 ENOX1Q8TC92 643 aaKnown RBP17.06■□□□□ 0.32
SPOCK3-201ENST00000357154 A0A1B0GUL7 405 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 ZNF213O14771 459 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 ZSCAN26Q16670 478 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 LONRF3Q496Y0 759 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 GJB4Q9NTQ9 266 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 PHKG2P15735 406 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 KRT40Q6A162 431 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 IQUBQ8NA54 791 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 ABCC12Q96J65 1359 aa17.05■□□□□ 0.32
SPOCK3-201ENST00000357154 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 LONRF2Q1L5Z9 754 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 PANX2Q96RD6 677 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 ADAM21Q9UKJ8 722 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 HAND2P61296 217 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 CT47A1Q5JQC4 288 aaPredicted RBP17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 TOGARAM2Q6ZUX3 1019 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 PDILTQ8N807 584 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 APPBP2Q92624 585 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 NAA15Q9BXJ9 866 aaKnown RBP17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 USP5P45974 858 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 GOLGA8FQ08AF8 430 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 GOLGA8DPQ0D2H9 430 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 EPC1Q9H2F5 836 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 ANGEL1Q9UNK9 670 aaKnown RBP17.04■□□□□ 0.32
SPOCK3-201ENST00000357154 CCDC175P0C221 793 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 WASHC4Q2M389 1173 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 SRGAP1Q7Z6B7 1085 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 CEP112Q8N8E3 955 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 AKAP2Q9Y2D5 859 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 BMP6P22004 513 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 TRDNQ13061 729 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 DHX58Q96C10 678 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
SPOCK3-201ENST00000357154 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 FKBP4Q02790 459 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 PDE4BQ07343 736 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 TRIM29Q14134 588 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 NR1I3Q14994 352 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 CEP126Q9P2H0 1117 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 RAB21Q9UL25 225 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
SPOCK3-201ENST00000357154 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.31
SPOCK3-201ENST00000357154 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.02■□□□□ 0.31
SPOCK3-201ENST00000357154 TATP17735 454 aaPredicted RBP17.01■□□□□ 0.31
SPOCK3-201ENST00000357154 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
SPOCK3-201ENST00000357154 LRRC24Q50LG9 513 aa17.01■□□□□ 0.31
SPOCK3-201ENST00000357154 TTC39AQ5SRH9 613 aa17.01■□□□□ 0.31
SPOCK3-201ENST00000357154 KANK3Q6NY19 840 aa17.01■□□□□ 0.31
SPOCK3-201ENST00000357154 HDXQ7Z353 690 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms